From baac53ffb34fafdecb3aced8c54447bf30a8d745 Mon Sep 17 00:00:00 2001 From: Erik Storrs Date: Mon, 8 Aug 2022 11:31:48 -0500 Subject: [PATCH] Update README.md --- README.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/README.md b/README.md index b35edd3..f15ae11 100644 --- a/README.md +++ b/README.md @@ -37,6 +37,8 @@ The tutorial/example notebook you can use to generate the bsub commands that run I would recommend putting your run directory inside `/scratch1` as tools tend to run faster in scratch1 than in storage1. +NOTE: you will likely need to make some small changes to the example notebook to specify input/output files, etc. + ## Output format There are two main output folders: `super_population` and `sub_population`. `super_population` contains predictions for the five major ancestry categories used by the 1k genomes project. `sub_population` includes predictions for the many sub-categories used by 1k genomes.