forked from nest/nest-simulator
-
Notifications
You must be signed in to change notification settings - Fork 0
/
.travis.yml
237 lines (222 loc) · 7.67 KB
/
.travis.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
# .travis.yaml
# This file is part of NEST.
#
# Copyright (C) 2004 The NEST Initiative
#
# NEST is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 2 of the License, or
# (at your option) any later version.
#
# NEST is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with NEST. If not, see <http://www.gnu.org/licenses/>.
# This is the Travis CI top-level script to setup and run the NEST
# build and test environment.
language: python
sudo: required
dist: bionic
env:
global:
- MAKEFLAGS="-j 2"
stages:
- Static-Code-Analysis
- Linux-GCC
- Linux-Clang
- macOS
jobs:
# list of build stages to run. Stages with the same name get run in parallel.
include:
- stage: Static-Code-Analysis
python: 3.8.2
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=STATIC_CODE_ANALYSIS
- stage: Linux-GCC
python: 3.8.2
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=MINIMAL
- stage: Linux-GCC
python: 3.8.2
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=MPI_ONLY
- stage: Linux-GCC
python: 3.8.2
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=OPENMP_ONLY
- stage: Linux-GCC
python: 3.8.2
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=FULL
- stage: Linux-Clang
language: cpp
python: 3.6.10
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=MINIMAL xNEST_BUILD_COMPILER=CLANG xNEST_PYTHON_VERSION=3.6.10
- stage: macOS
os: osx
osx_image: xcode12.2 # Python 3.9.0 running on macOS 10.15.7
language: shell # language 'python' results in errors on macOS
env: CACHE_NAME=JOB xNEST_BUILD_TYPE=MINIMAL
cache:
directories:
- $HOME/.cache
- $HOME/.pyenv/versions
- /usr/local/Homebrew
addons:
apt:
sources:
- *BASE_SOURCES
- ubuntu-toolchain-r-test
packages:
- *BASE_PACKAGES
- gcc-8
- g++-8
- clang-7
- build-essential
- cmake
- libltdl-dev
- libreadline6-dev
- libncurses5-dev
- libgsl0-dev
- python3-all-dev
- ipython3
- pkg-config
- openmpi-bin
- libopenmpi-dev
- libpcre3
- libpcre3-dev
- llvm-9-dev
- jq
- pep8
- libboost-filesystem-dev
- libboost-regex-dev
- libboost-wave-dev
- libboost-python-dev
- libboost-program-options-dev
- libboost-test-dev
cache:
directory:
- $HOME/.cache
before_install:
- export SOURCEDIR=$PWD
# select the right C++ compiler version (gcc8) -- note that update-alternatives is not available on MacOS
- |
if [ "$TRAVIS_OS_NAME" = "linux" ]; then
ls -lh /usr/bin/g++*
ls -lh /usr/bin/gcc*
ls -lh /usr/bin/c++*
sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-8 20
sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-5 10
sudo update-alternatives --auto g++
sudo update-alternatives --list g++
sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-8 20
sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-5 10
sudo update-alternatives --auto gcc
sudo update-alternatives --list gcc
sudo update-alternatives --list c++
sudo update-alternatives --auto c++
g++ --version
/usr/bin/c++ --version
fi
- |
if [ "$xNEST_BUILD_TYPE" != "STATIC_CODE_ANALYSIS" ]; then
echo "+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +"
echo "+ P R E P A R E N E S T B U I L D E N V I R O N M E N T +"
echo "+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +"
cp extras/install_csa-libneurosim.sh $HOME
cp extras/install_music.sh $HOME
cp extras/install_sionlib.sh $HOME
cp extras/install_libboost.sh $HOME
cd $HOME/build
echo $PATH
if [ "$xNEST_BUILD_COMPILER" = "CLANG" ]; then
pyenv global $xNEST_PYTHON_VERSION
fi
if [ "$TRAVIS_OS_NAME" = "osx" ]; then
brew --version
brew update
brew info python
export PATH="/usr/local/opt/python/libexec/bin:$PATH" # To use homebrew's Python
brew tap brewsci/science
brew tap brewsci/bio
brew install coreutils gsl open-mpi automake autoconf libtool
brew unlink gcc
brew install gcc@8
brew link gcc@8
find /usr/local/Cellar/ -name Python\.h
find /usr/local/Cellar/ -name \*python\*dylib
fi
# Upgrade pip and setuptools
pip install --upgrade pip setuptools
# Installing additional packages using pip as they only have
# outdated versions in the Travis package whitelist.
# terminaltables is required by parse_travis_log.py to create
# the build summary.
pip install scipy junitparser mpi4py
if [ "$TRAVIS_OS_NAME" != "osx" ]; then
pip3 install numpy nose
pip3 install cython matplotlib terminaltables
else
# Due to the issue with numpy C-extensions, have to stick to a specific version on OsX
#https://numpy.org/devdocs/user/troubleshooting-importerror.html
pip3 install numpy==1.19.3
pip3 install cython matplotlib terminaltables
# nose must be installed user-only to avoid permissions conflict for man-pages
wget https://files.pythonhosted.org/packages/15/d8/dd071918c040f50fa1cf80da16423af51ff8ce4a0f2399b7bf8de45ac3d9/nose-1.3.7-py3-none-any.whl
pip3 install --user nose-1.3.7-py3-none-any.whl
fi
pip list
fi
install:
- |
if [ "$xNEST_BUILD_TYPE" != "STATIC_CODE_ANALYSIS" ]; then
which cython
cython --version
which python
python --version
which pip
pip list
which nosetests
nosetests --version
nosetests --plugins
which cmake
cmake --version
echo ${CC}
echo ${CXX}
fi
before_script:
# Change directory back to the NEST source code directory.
- cd $SOURCEDIR
- chmod +x extras/travis_build.sh
script:
- set -o pipefail
- ./extras/travis_build.sh 2>&1 | tee travis_build.sh.log
- |
if [ "$xNEST_BUILD_TYPE" != "STATIC_CODE_ANALYSIS" ]; then
python extras/parse_travis_log.py travis_build.sh.log "$xNEST_BUILD_TYPE" "$TRAVIS_BUILD_DIR"
fi
before_deploy:
- |
if [ "$xNEST_BUILD_TYPE" != "STATIC_CODE_ANALYSIS" ]; then
cd $TRAVIS_BUILD_DIR/build
tar -zcvf reports.tar.gz ./reports
tar -zcvf docs.tar.gz $TRAVIS_BUILD_DIR/result/share/doc/nest/*.*
mkdir -p $TRAVIS_BUILD_DIR/build/artefacts_upload
mv docs.tar.gz $TRAVIS_BUILD_DIR/build/artefacts_upload
mv reports.tar.gz $TRAVIS_BUILD_DIR/build/artefacts_upload
fi
# S3 Deployment (Uploading the Travis CI build artefacts to Amazon S3).
#deploy:
# provider: s3
# access_key_id:
# secure: $ARTIFACTS_KEY
# secret_access_key:
# secure: $ARTIFACTS_SECRET
# bucket: "nest-travis-artefacts"
# region: eu-central-1
# skip_cleanup: true
# on:
# repo: nest/nest-simulator
# branch: master
# condition: $xNEST_BUILD_TYPE != STATIC_CODE_ANALYSIS
# local-dir: "$TRAVIS_BUILD_DIR/build/artefacts_upload"
# upload-dir: "$TRAVIS_REPO_SLUG/$TRAVIS_BUILD_NUMBER/$TRAVIS_JOB_NUMBER"
# acl: bucket_owner_full_control