Skip to content

Issues: dnanexus-rnd/GLnexus

pVCF representation rework
#210 opened Feb 18, 2020 by mlin
Open 1
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

88 Open 57 Closed
88 Open 57 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

calling haploid chromosomes
#316 opened Nov 14, 2024 by splaisan
This image on your wiki has a transparent background and is unreadable in dark mode
#315 opened Nov 12, 2024 by dvg-p4
Allele Specific QC filtering at multi-allelic sites
#314 opened Sep 26, 2024 by jjfarrell
Inquiry Regarding IOError Encountered During Multiple Rounds of Merging gVCF Files Using GLnexus
#313 opened Jul 4, 2024 by zhanxiangzong
1
Merging vcf files error with glnexus:v1.2.7
#312 opened May 7, 2024 by poddarharsh15
RNC is ".." on site with DP=1, but it's "D." on site with DP=2
#311 opened Apr 11, 2024 by esctrionsit
bad_alloc
#309 opened Mar 7, 2024 by bbimber
6
Optimizing memory usage
#308 opened Mar 5, 2024 by georgiiprovisor
RNC field not comma-separated
#306 opened Feb 21, 2024 by holtgrewe
1
std::logic_error when running Basic Command
#305 opened Jan 30, 2024 by cantlap
1
Failed Install when using Non-Docker file Install
#304 opened Jan 30, 2024 by cantlap
IOError: RocksDB kIOError
#302 opened Dec 19, 2023 by fsw10
Genotyping specific sites from GVCF
#300 opened Nov 16, 2023 by bwubb
Invalid: allele is not a DNA sequence
#299 opened Nov 10, 2023 by bartcharbon
1
GLnexus , error while combining gvcf files
#298 opened Nov 9, 2023 by DineshRavindraRaju
3
Merging GVCF or VCF?
#296 opened Nov 1, 2023 by alanlamsiu
./runglnexus.sh: line 2: 20506 Terminated
#295 opened Oct 25, 2023 by gotouerina
deepvarinat
#293 opened Sep 15, 2023 by Tonitsk8264
Merging and variant loss
#292 opened Sep 12, 2023 by Fred-07
X and Y-chromosome calling
#291 opened Jul 5, 2023 by shaze
Is capnp-test failure a cause of worry?
#290 opened Jun 14, 2023 by ghost
The configuration presents for DeepVariant whole genome sequencing
#289 opened Jun 6, 2023 by xunzhizhang
1
Exception deserializing BCF bucket
#288 opened Apr 3, 2023 by lvclark
error
#287 opened Mar 19, 2023 by shinlin77
3
(DP) Depth value being incorrectly set to 0 for calls
#286 opened Mar 12, 2023 by carsonhh
2
ProTip! Mix and match filters to narrow down what you’re looking for.