structures.py

from typing import TypedDict, List, Optional
from typing_extensions import NotRequired

class GwasCatalogCategories(TypedDict):
    """Typed dict structure to store EFO data by parent id"""
    EFO_0000405: NotRequired[List]
    EFO_0004324: NotRequired[List]
    EFO_0004529: NotRequired[List]
    EFO_0004503: NotRequired[List]
    EFO_0000540: NotRequired[List]
    EFO_0000589: NotRequired[List]
    EFO_0000001: NotRequired[List]
    EFO_0000408: NotRequired[List]
    GO_0008150: NotRequired[List]
    EFO_0004298: NotRequired[List]
    EFO_0000319: NotRequired[List]
    EFO_0000618: NotRequired[List]
    EFO_0001444: NotRequired[List]
    EFO_0000616: NotRequired[List]
    EFO_0004872: NotRequired[List]
    EFO_0004582: NotRequired[List]
    EFO_0004732: NotRequired[List]


# Current parent efo_ids 
"""
['EFO_0000405', 'EFO_0004324', 'EFO_0004529', 'EFO_0004503', 'EFO_0000540', 'EFO_0000589',
 'EFO_0000001', 'EFO_0000408', 'GO_0008150', 'EFO_0004298', 'EFO_0000319', 'EFO_0000618',
 'EFO_0001444', 'EFO_0000616', 'EFO_0004872', 'EFO_0004582', 'EFO_0004732']
 """