From a98c70cf28f4a879abfd7fb737c954e283cf5ac0 Mon Sep 17 00:00:00 2001 From: John Halley Gotway Date: Fri, 15 Sep 2023 14:56:43 -0600 Subject: [PATCH] Feature #2681 v12.0.0-beta1 (#2685) --- docs/Users_Guide/release-notes.rst | 246 +++-------------------------- docs/conf.py | 6 +- 2 files changed, 23 insertions(+), 229 deletions(-) diff --git a/docs/Users_Guide/release-notes.rst b/docs/Users_Guide/release-notes.rst index 30a115abc1..2f8cc777a6 100644 --- a/docs/Users_Guide/release-notes.rst +++ b/docs/Users_Guide/release-notes.rst @@ -9,245 +9,39 @@ When applicable, release notes are followed by the GitHub issue number which des enhancement, or new feature (`MET GitHub issues `_). Important issues are listed **in bold** for emphasis. -MET Version 11.1.0 release notes (20230731) -------------------------------------------- +MET Version 12.0.0-beta1 release notes (20230915) +------------------------------------------------- .. dropdown:: Repository, build, and test - * Add modulefiles for supported systems to the repository (`#2415 `_). - * Add LICENSE.md to the repository (`#2461 `_). - * Update the copyright year to 2023 and increase the version number to 11.1.0 (`#2469 `_). - * Enhance compile_MET_all.sh to allow the user to specify the compiler and Python versions to load (`#2485 `_). - * Enhance compile_MET_all.sh to include the library/app name in the log filename (`#2540 `_). - * Add free_disk_space.sh script to the MET repository (`#2597 `_). - - .. dropdown:: Documentation - - * Enhance the Release Notes by adding dropdown menus (`#2146 `_). - * Improve documentation on Python Embedding for point observations (`#2303 `_). - * Create dropdown menus for Appendix A (`#2460 `_). - * Clarify MET Compile Time Python requirements (`#2490 `_). - * Update the documentation for the HSS and HSS_EC statistics (`#2492 `_). - * Update the documentation for the ens, NEP, and NMEP configuration options (`#2513 `_). - * Revise TC-Diag documentation for version 11.1.0 (`#2558 `_). + * Refine the METbaseimage to compile dependent libraries from a single tar file (`METbaseimage#9 `_). + * Update METbaseimage to complete the transition to the Debian 12 (bookworm) base image (`METbaseimage#12 `_). + * Update the ``install_met_env.generic`` configuration file (`#2643 `_). + * Switch SonarQube server (mandan to needham) (`#2650 `_). + * Update GitHub issue and pull request templates to reflect the current development workflow details (`#2659 `_). + * Update the unit test diff logic to handle SEEPS, SEEPS_MPR, and MODE CTS line type updates (`#2665 `_). .. dropdown:: Bugfixes - * Bugfix: Fix the MET CF-Compliant NetCDF library code to Polar Stereographic data from NSIDC Sea Ice Edge NetCDF files (`#2218 `_). - * Bugfix: Remove override keyword to avoid C++11 dependency (`#2380 `_). - * Bugfix: Fix ASCII2NC to not compute AOD 550 if other inputs are negative values (`#2383 `_). - * Bugfix: Fix PB2NC to report accurate total observation counts in log messages (`#2387 `_). - * Bugfix: Update the MET flowchart for version 11.0.0 (`#2389 `_). - * Bugfix: Fix issues with the met_compile_all.sh script and associated tar files (`#2390 `_). - * Bugfix: Correct definitions of NCEP grid numbers 172 and 220 (`#2399 `_). - * Bugfix: Correct the branch name for the SonarQube scanning nightly (`#2401 `_). - * Bugfix: Address MET-11.0.0 SonarQube Blocker Bugs (`#2402 `_). - * Bugfix: Refine fix for handling empty configuration files (`#2408 `_). - * Bugfix: Fix time interpolation of monthly climatology data between December 15 and January 15 (`#2412 `_). - * Bugfix: Fix ASCII2NC to handle missing NDBC buoy location information (`#2426 `_). - * Bugfix: Fix the MET vx_pointdata_python library to handle MET_PYTHON_EXE for python embedding of point observations (`#2428 `_). - * Bugfix: Refine the regrid dictionary's data conversion and censoring operations and fix climo time matching logic for a single monthly climo file (`#2437 `_). - * Bugfix: Fix the creation of the MET User's Guide PDF (`#2449 `_). - * Bugfix: Fix inconsistent ASCII2NC AIRNOW location lookup logic (`#2452 `_). - * Bugfix: Fix support for the YYYYMMDD format in NetCDF level timestrings (`#2482 `_). - * Bugfix: AERONET the lat/lon is not changed with different station ID (`#2493 `_). - * Bugfix: Fix the Clang compilation of MET version 11 (`#2514 `_). - * Bugfix: dtype in Python embedding example script and appendixF correction (`#2518 `_). - * Bugfix: Fix the fill value setting used in the write_tmp_dataplane internal Python embedding script (`#2525 `_). - * **Bugfix: Resolve compilation problems due to need for \-std=c++11** (`#2531 `_). - * Bugfix: Fix the TC-Stat RIRW runtime error when computing CTS statistics from an empty contingency table (`#2542 `_).\ - * Bugfix: Refine support for LAEA grids via NetCDF and GRIB2 files (`#2565 `_). - * Bugfix: Fix logic for Python embedding with data censoring and/or conversion (`#2575 `_). - * Bugfix: Fix reading of upside-down CF-compliant NetCDF Rotated Lat/Lon data (`#2578 `_). - * Bugfix: Unknown ld Flag on Macos causes MET compilation to fail (`#2596 `_). - * Bugfix: Problem compiling MET on MacOS using GCC 12.3.0 (`#2615 `_). - - .. dropdown:: Enhancements - - .. dropdown:: SonarQube - - * SonarQube: Further reduce bugs for MET-11.1.0-beta2 (`#2474 `_). - * SonarQube: Replace all instances of NULL with nullptr (`#2504 `_). - * SonarQube: Remove code that will never be executed (`#2506 `_). - * SonarQube: Further reduce findings for MET-11.1.0-rc1 (`#2521 `_). - - .. dropdown:: Python Embedding - - * Convert the python list to the numpy array for the python embedding at the base class (`#2386 `_). - * Refine Python runtime environment (`#2388 `_). - * **Upgrade to using Python 3.10.4** (`#2421 `_). - * **Enhance the MET point processing tools to read the Python 'point_data' variable instead of just 'met_point_data'** (`#2285 `_). - - .. dropdown:: Common Libraries - - * **Add support for the Lambert Azimuthal Equal Area grids** (`#1693 `_). - * Update the default ASCII2NC message_type_map configuration option for Little R input data (`#2487 `_). - * Merge older and newer MRMS GRIB2 table files (`#2508 `_). - - .. dropdown:: Application Code - - * **Enhance Gen-Vx-Mask shapefile masking to support multiple shapes and specify shape metadata** (`#1060 `_). - * **Enhance Multivariate MODE to generate object statistics for each input field requested by the user** (`#1283 `_). - * Update NDBC locations prior to the MET-11.1.0 release (`#2511 `_). - * Enhance MODE to bound check interest_function corner points in the range 0 to 1 (`#2545 `_). - - .. dropdown:: Tropical Cyclone Tools - - * **Create an initial development version of a new TC-Diag tool to support the computation of tropical cyclone diagnostics** (`#2168 `_). - * **Enhance TC-Stat to write the RIRW job CTC/CTS output to a .stat output file** (`#2425 `_). - * **Enhance TC-Pairs to disable the output of consensus track members** (`#2429 `_). - * Enhance TC-RMW to reorder the dimensions of the NetCDF output to store the gridded dimensions last (`#2523 `_). - * **Enhance TC-Pairs to derive the full circle wind radius from the wind radius quadrants** (`#2532 `_). - * Enhance TC-Gen to parse GTWO shapefile lead times from the data rather than assuming them to be 2, 5, and 7 days (`#2552 `_). - -MET Version 11.0.0 release notes (20221209) -------------------------------------------- - - .. dropdown:: Repository, build, and test - - * **Restructure the contents of the MET repository so that it matches the existing release tarfiles** (`#1920 `_). - * **Add initial files to create the MET compilation environment in the dtcenter/met-base Docker image** (`dtcenter/METbaseimage#1 `_). - * Restructure the MET Dockerfiles to create images based on the new METbaseimage (`#2196 `_). - * Enhance METbaseimage to support NetCDF files using groups in the enhanced data model (`dtcenter/METbaseimage#6 `_). - * Add .zenodo.json file to add metadata about releases (`#2198 `_). - * Update the SonarQube version used for routine software scans (`#2270 `_). - * Fix OpenMP compilation error for GCC 9.3.0/9.4.0 (`#2106 `_). - * Fix oom() compile time linker error (`#2238 `_). - * Fix MET-11.0.0-beta3 linker errors (`#2281 `_). - * Fix GHA documentation workflow (`#2282 `_). - * Fix GHA warnings and update the version of actions (i.e. actions/checkout@v3) (`#2297 `_). - - .. dropdown:: Documentation - - * Create outline for the MET Contributor's Guide (`#1774 `_). - * Document PB2NC's handling of quality markers (`#2278 `_). - * Move release notes into its own chapter in the User's Guide (`#2298 `_). - - .. dropdown:: Bugfixes - - * Fix regression test differences in pb2nc and ioda2nc output (`#2102 `_). - * Fix support for reading rotated lat/lon grids from CF-compliant NetCDF files (`#2115 `_). - * Fix support for reading rotated lat/lon grids from GRIB1 files (grid type 10) (`#2118 `_). - * Fix support for int64 NetCDF variable types (`#2123 `_). - * Fix Stat-Analysis to aggregate the ECNT ME and RMSE values correctly (`#2170 `_). - * Fix NetCDF library code to process scale_factor and add_offset attributes independently (`#2187 `_). - * Fix Ensemble-Stat to work with different missing members for two or more variables (`#2208 `_). - * Fix truncated station_id name in the output from IODA2NC (`#2216 `_). - * Fix Stat-Analysis aggregation of the neighborhood statistics line types (`#2271 `_). - * Fix Point-Stat and Ensemble-Stat GRIB table lookup logic for python embedding of point observations (`#2286 `_). - * Fix ascii2nc_airnow_hourly test in unit_ascii2nc.xml (`#2306 `_). - * Fix TC-Stat parsing of TCMPR lines (`#2309 `_). - * Fix ASCII2NC logic for reading AERONET v3 data (`#2370 `_). + * Bugfix: Refine support for coordinate dimensions in CF-compliant NetCDF files (`#2638 `_). + * Bugfix: Fix logic for computing the 100-th percentile (`#2644 `_). .. dropdown:: Enhancements - .. dropdown:: NetCDF - - * **Enhance MET's NetCDF library interface to support level strings that include coordinate variable values instead of just indexes** (`#1815 `_). - * Enhance MET to handle NC strings when processing CF-Compliant NetCDF files (`#2042 `_). - * Enhance MET to handle CF-compliant time strings with an offset defined in months or years (`#2155 `_). - * Refine NetCDF level string handling logic to always interpret @ strings as values (`#2225 `_). - - .. dropdown:: GRIB - - * Add support for reading National Blend Model GRIB2 data (`#2055 `_). - * Update the GRIB2 MRMS table in MET (`#2081 `_). - - .. dropdown::Python - - * Reimplement the pntnc2ascii.R utility Rscript in Python (`#2085 `_). - * Add more error checking for python embedding of point observations (`#2202 `_). - * **Add a Python helper script/function to transform point_data objects to met_point_data objects for Python Embedding** (`#2302 `_). - - .. dropdown:: METplus-Internal - - * MET: Replace fixed length character arrays with strings (`dtcenter/METplus-Internal#14 `_). - * MET: Add a timestamp to the log output at the beginning and end of each MET tool run (`dtcenter/METplus-Internal#18 `_). - * MET: Add the user ID and the command line being executed to the log output at beginning and end of each MET tool run (`dtcenter/METplus-Internal#19 `_). - * MET: Enhance MET to have better signal handling for shutdown events (`dtcenter/METplus-Internal#21 `_). - - .. dropdown:: Common Libraries - - * **Define new grid class to store semi-structured grid information (e.g. lat or lon vs level or time)** (`#1954 `_). - * Refine warning/error messages when parsing thresholds (`#2211 `_). - * Remove namespace specification from header files (`#2227 `_). - * Update MET version number to 11.0.0 (`#2132 `_). - * Store unspecified accumulation interval as 0 rather than bad data (`#2250 `_). - * Add sanity check to error out when both is_u_wind and is_v_wind are set to true (`#2357 `_). - - .. dropdown:: Statistics - - * **Add Anomaly Correlation Coefficient to VCNT Line Type** (`#2022 `_). - * **Allow 2x2 HSS calculations to include user-defined EC values** (`#2147 `_). - * **Add the fair CRPS statistic to the ECNT line type in a new CRPS_EMP_FAIR column** (`#2206 `_). - * **Add MAE to the ECNT line type from Ensemble-Stat and for HiRA** (`#2325 `_). - * **Add the Mean Absolute Difference (SPREAD_MD) to the ECNT line type** (`#2332 `_). - * **Add new bias ratio statistic to the ECNT line type from Ensemble-Stat and for HiRA** (`#2058 `_). - - .. dropdown:: Configuration and masking - - * Define the Bukovsky masking regions for use in MET (`#1940 `_). - * **Enhance Gen-Vx-Mask by adding a new poly_xy masking type option** (`#2152 `_). - * Add M_to_KFT and KM_to_KFT functions to ConfigConstants (`#2180 `_). - * Update map data with more recent NaturalEarth definitions (`#2207 `_). - - .. dropdown:: Point Pre-Processing Tools - - * **Enhance IODA2NC to support IODA v2.0 format** (`#2068 `_). - * **Add support for EPA AirNow ASCII data in ASCII2NC** (`#2142 `_). - * Add a sum option to the time summaries computed by the point pre-processing tools (`#2204 `_). - * Add "station_ob" to metadata_map as a message_type metadata variable for ioda2nc (`#2215 `_). - * **Enhance ASCII2NC to read NDBC buoy data** (`#2276 `_). - * Print ASCII2NC warning message about python embedding support not being compiled (`#2277 `_). - - .. dropdown:: Point-Stat, Grid-Stat, Stat-Analysis - - * Add support for point-based climatologies for use in SEEPS (`#1941 `_). - * **Enhance Point-Stat to compute SEEPS for point observations and write new SEEPS and SEEPS_MPR STAT line types** (`#1942 `_). - * **Enhance Grid-Stat to compute SEEPS for gridded observations and write the SEEPS STAT line type** (`#1943 `_). - * Sort mask.sid station lists to check their contents more efficiently (`#1950 `_). - * **Enhance Stat-Analysis to aggregate SEEPS_MPR and SEEPS line types** (`#2339 `_). - * Relax Point-Stat and Ensemble-Stat logic for the configuration of message_type_group_map (`#2362 `_). - * Fix Point-Stat and Grid-Stat logic for processing U/V winds with python embedding (`#2366 `_). - - .. dropdown:: Ensemble Tools - - * **Remove ensemble post-processing from the Ensemble-Stat tool** (`#1908 `_). - * Eliminate Gen-Ens-Prod warning when parsing the nbhrd_prob dictionary (`#2224 `_). - - .. dropdown:: Tropical Cyclone Tools - - * **Enhance TC-Pairs to read hurricane model diagnostic files (e.g. SHIPS) and TC-Stat to filter the new data** (`#392 `_). - * **Enhance TC-Pairs consensus logic to compute the spread of the location, wind speed, and pressure** (`#2036 `_). - * Enhance TC-RMW to compute tangential and radial winds (`#2072 `_). - * Refine TCDIAG output from TC-Pairs as needed (`#2321 `_). - * Rename the TCDIAG SOURCE column as DIAG_SOURCE (`#2337 `_). - - .. dropdown:: Miscellaneous - - * Enhance MTD to process time series with non-uniform time steps, such as monthly data (`#1971 `_). - * Refine Grid-Diag output variable names when specifying two input data sources (`#2232 `_). - * Add tmp_dir configuration option to the Plot-Point-Obs tool (`#2237 `_). + * Refine TC-Diag logic for handling missing data (`#2609 `_). + * **Update ioda2nc to support version 3 IODA files** (`#2640 `_). + * **Enhance MODE CTS output file to include missing categorical statistics, including SEDI** (`#2648 `_). + * **Enhance MET to compile and link against the Proj library** (`#2669 `_). + * Change the default setting for the model string from "WRF" to "FCST" in the default MET configuration files (`#2682 `_). MET Upgrade Instructions ======================== -MET Version 11.1.0 upgrade instructions +MET Version 12.0.0 upgrade instructions --------------------------------------- -* If compiling support for PYTHON (:numref:`compiling_python_support`), in addition to $MET_PYTHON_CC and $MET_PYTHON_LD, set **$MET_PYTHON_BIN_EXE** to specify the desired python executable to be used (`#2428 `_). - -* If running TC-Pairs to generate consensus tracks, update your TC-Pairs configuration file to include the new **write_members** option (`#2429 `_). - -* If using Python embedding for point observations, and the following lines of code are in your Python script please remove them and refactor your Python script following the instructions in the `User's Guide for Python embedding for point observations `_: - - .. code-block:: Python - - from met_point_obs import convert_point_data - ... - met_point_data = convert_point_data(point_data) - -MET Version 11.0.0 upgrade instructions ---------------------------------------- +* MET Version 12.0.0 introduces three new required dependencies: -* Ensemble post-processing has been fully removed from Ensemble-Stat in version 11.0.0. It can be performed using the Gen-Ens-Prod tool. + * The `Proj `_ library dependency was added in the beta1 development cycle (`#2669 `_). + * The `Atlas `_ library dependency will be added in the beta2 development cycle (`#2574 `_). + * The `ecKit `_ library dependency will be added in the beta2 development cycle (`#2574 `_). diff --git a/docs/conf.py b/docs/conf.py index c3f0ca37c1..2a461b7d3a 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -19,12 +19,12 @@ project = 'MET' author = 'UCAR/NCAR, NOAA, CSU/CIRA, and CU/CIRES' -author_list = 'Jensen, T., J. Prestopnik, H. Soh, L. Goodrich, B. Brown, R. Bullock, J. Halley Gotway, K. Newman, J. Opatz' -version = '11.1.0' +author_list = 'Prestopnik, J., H. Soh, L. Goodrich, B. Brown, R. Bullock, J. Halley Gotway, K. Newman, J. Opatz, T. Jensen' +version = '12.0.0-beta1' verinfo = version release = f'{version}' release_year = '2023' -release_date = f'{release_year}-07-31' +release_date = f'{release_year}-09-15' copyright = f'{release_year}, {author}' # -- General configuration ---------------------------------------------------