401 3d volrat tests (#417) #121
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# This workflow will install Python dependencies and run tests for a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Unit tests | |
on: | |
push: | |
branches: | |
- develop | |
- develop-ref | |
- feature_* | |
- main_* | |
- bugfix_* | |
- test_* | |
paths-ignore: | |
- 'docs/**' | |
- '.github/pull_request_template.md' | |
- '.github/ISSUE_TEMPLATE/**' | |
- '**/README.md' | |
- '**/LICENSE.md' | |
pull_request: | |
types: [opened, reopened, synchronize] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.10"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
# try installing scikit-image explicitly. Using requirements.txt versions doesn't seem to build correctly | |
python -m pip install -U scikit-image | |
# install the coverage.py code coverage tool | |
python3 -m pip install pytest-cov | |
- name: Test with pytest | |
# these are tests that don't have external dependencies (i.e. need to run on Linux test hosts where large datasets reside or require exact machine type for | |
# image comparisons to work, etc.) | |
run: | | |
coverage run -m pytest | |
coverage report -m | |
coverage html | |
- name: Archive code coverage results | |
uses: actions/upload-artifact@v4 | |
with: | |
name: code-coverage-report | |
path: htmlcov/index.html | |