PARF is an MPI-enabled parallel random forest (RF) algorithm implemented in Fortran, by Goran Topić and Tomislav Šmuc, Ruđer Bošković Institute, Croatia.
- parf2008 and parf2016: contains the source code forked from google code
- sources: contains untouched downloads from google and www.irb.hr
- docs: contains documentation, sourced from source code as well as elsewhere, converted from google wiki format to github flavored markdown format using pandoc, including some additional personal notes
- parf.ipynb: compiling using Intel Fortran 2021.2
- parf-sd.ipynb: compiling on SDumont supercomputer
- AL Boulesteix et al. Overview of Random Forest Methodology and Practical Guidance with Emphasis on Computational Biology and Bioinformatics. Mention PARF https://epub.ub.uni-muenchen.de/13766/1/TR.pdf
- G Topic et al. Reimplementation of the Random Forest Algorithm. Parallel Numerics, Theory and Applications https://www.researchgate.net/publication/256089569
- S Cabras et al. A strategy analysis for genetic association studies with known inbreeding. Uses PARF with OpenMPI libraries https://link.springer.com/article/10.1186/1471-2156-12-63
- BA McKinney et al. Capturing the Spectrum of Interaction Effects in Genetic Association Studies by Simulated Evaporative Cooling Network Analysis. Uses a parallel PARF https://www.researchgate.net/publication/24214253
- Breiman & Cutler. Random Forests https://www.stat.berkeley.edu/~breiman/RandomForests/cc_home.htm
- Ruder Boskovic Institure. PARF https://www.irb.hr/eng/Scientific-Support-Centres/Centre-for-Informatics-and-Computing/Projects2/IT-projects/PARF
- Viktor Bojović (2008). Parallel Random Forests – PARF http://veppar.irb.hr/index.php?option=com_content&task=view&id=16
- Karolj Skala (2009). PARF - Parallel RF Algorithm https://translate.google.com/translate?sl=auto&tl=en&u=http://www.parf.irb.hr/
- Google Code Archive (2008). PARF - Parallel Random Forest Algorithm https://code.google.com/archive/p/parf/