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Repository API receipt error catching #67

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bedroesb opened this issue Nov 7, 2024 · 0 comments · May be fixed by #96

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bedroesb commented Nov 7, 2024

Currently, when for example no data is submitted before metadata submission, ENA will return errors in the "messages" filed. The script can currently not find accessions in those messages:
https://github.com/elixir-europe/MARS/blob/main/repository-services/isajson-ena/src/main/java/com/elixir/biohackaton/ISAToSRA/sra/service/MarsReceiptService.java#L76

this needs to be captured

bedroesb assigned Pedram-A-Keyvani

Pedram-A-Keyvani linked a pull request

that will close this issue

Mars receipt exception #96

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bedroesb linked a pull request

that will close this issue

Mars receipt exception #96

Open

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