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At the moment there is no direct integration with meteor, although this is in the roadmap and should be possible in future versions (stay tuned!).
That said, in the meanwhile as a workaround you can do:
embark build
which will make the dapp files available at dist/dapp, you can then copy the files over to your meteor app folder and make use of it yet.
dist/dapp
See also how to deploy to the testnet
http://embark.status.im/