Dockerfile_custom

FROM continuumio/miniconda3

RUN apt-get update && apt-get install -y \
    tini \
    && rm -rf /var/lib/apt/lists/*

RUN conda update conda
RUN conda update --all
COPY . /src
#COPY environment.yml /environment.yml
# Update Python environment based on environment.yml (if present)
# RUN conda env update -f /src/environment.yml
RUN conda env create -f /src/environment.yml

RUN conda clean -afy && \
    conda init bash

#ENV TINI_VERSION v0.16.1
#ADD https://github.com/krallin/tini/releases/download/${TINI_VERSION}/tini /usr/bin/tini
#RUN chmod +x /usr/bin/tini
#
#ENTRYPOINT [ "/usr/bin/tini", "--" ]
#CMD [ "/bin/bash" ]

# Pull the environment name out of the environment.yml
#ARG CONDA_ENV_NAME="$(head -1 /src/environment.yml | cut -d' ' -f2)"
ARG CONDA_ENV_NAME=gp
ENV CONDA_ENV_NAME="$CONDA_ENV_NAME"
RUN echo $CONDA_ENV_NAME
#RUN echo "source activate $CONDA_ENV_NAME" > ~/.bashrc
ENV PATH "/opt/conda/envs/${CONDA_ENV_NAME}/bin:${PATH}"

#ENTRYPOINT ["source /opt/conda/bin/activate trendfinder"]
#CMD ["/docker-entrypoint.sh"]

EXPOSE 9999/tcp

WORKDIR /src
ENTRYPOINT [ "tini", "--" ]
#CMD [ "/bin/bash" ]
CMD ["bash", "-c","conda run --no-capture-output -n $CONDA_ENV_NAME jupyter nbextension enable --py widgetsnbextension && conda run --no-capture-output -n $CONDA_ENV_NAME jupyter notebook --port=9999 --no-browser --ip=0.0.0.0 --allow-root"]