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DESCRIPTION
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DESCRIPTION
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Package: serofoi
Title: Estimates the Force-of-Infection of a Given Pathogen from
Population Based Seroprevalence Studies
Version: 0.1.0
Authors@R: c(
person("Zulma M.", "Cucunubá", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-8165-3198")),
person("Nicolás", "T. Domínguez", , "[email protected]", role = "aut",
comment = c(ORCID = "0009-0002-8484-1298")),
person("Ben", "Lambert", role = "aut"),
person("Pierre", "Nouvellet", role = "aut"),
person("Miguel", "Gámez", role = "ctb"),
person("Geraldine", "Gómez", role = "ctb",
comment = c(ORCID = "0009-0007-8701-0568")),
person("Jaime A.", "Pavlich-Mariscal", role = "ctb",
comment = c(ORCID = "0000-0002-3892-6680"))
)
Description: Estimate time-varying Force-of-Infection of a given pathogen
from population based seroprevalence studies using a bayesian
framework.
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/serofoi/,
https://github.com/epiverse-trace/serofoi
BugReports: https://github.com/epiverse-trace/serofoi/issues
Depends:
R (>= 3.5.0)
Imports:
bayesplot,
checkmate,
cowplot,
dplyr,
ggplot2,
Hmisc,
loo,
methods,
purrr,
Rcpp (>= 0.12.0),
rstan (>= 2.18.1),
rstantools (>= 2.3.1)
Suggests:
knitr,
rmarkdown,
spelling,
testthat (>= 3.0.0),
vdiffr
LinkingTo:
BH (>= 1.66.0),
Rcpp (>= 0.12.0),
RcppEigen (>= 0.3.3.3.0),
RcppParallel (>= 5.0.1),
rstan (>= 2.18.1),
StanHeaders (>= 2.18.0)
VignetteBuilder:
knitr
Additional_repositories: https://mc-stan.org/r-packages/
Biarch: true
Config/Needs/website: epiverse-trace/epiversetheme
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-GB
LazyData: true
NeedsCompilation: yes
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
SystemRequirements: GNU make