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eval_video_segmentation.py
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eval_video_segmentation.py
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# Copyright (c) Facebook, Inc. and its affiliates.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Some parts are taken from https://github.com/Liusifei/UVC
"""
import os
import copy
import glob
import queue
from urllib.request import urlopen
import argparse
import numpy as np
from tqdm import tqdm
import cv2
import torch
import torch.nn as nn
from torch.nn import functional as F
from PIL import Image
from torchvision import transforms
import utils
import vision_transformer as vits
@torch.no_grad()
def eval_video_tracking_davis(args, model, frame_list, video_dir, first_seg, seg_ori, color_palette):
"""
Evaluate tracking on a video given first frame & segmentation
"""
video_folder = os.path.join(args.output_dir, video_dir.split('/')[-1])
os.makedirs(video_folder, exist_ok=True)
# The queue stores the n preceeding frames
que = queue.Queue(args.n_last_frames)
# first frame
frame1, ori_h, ori_w = read_frame(frame_list[0])
# extract first frame feature
frame1_feat = extract_feature(model, frame1).T # dim x h*w
# saving first segmentation
out_path = os.path.join(video_folder, "00000.png")
imwrite_indexed(out_path, seg_ori, color_palette)
mask_neighborhood = None
for cnt in tqdm(range(1, len(frame_list))):
frame_tar = read_frame(frame_list[cnt])[0]
# we use the first segmentation and the n previous ones
used_frame_feats = [frame1_feat] + [pair[0] for pair in list(que.queue)]
used_segs = [first_seg] + [pair[1] for pair in list(que.queue)]
frame_tar_avg, feat_tar, mask_neighborhood = label_propagation(args, model, frame_tar, used_frame_feats, used_segs, mask_neighborhood)
# pop out oldest frame if neccessary
if que.qsize() == args.n_last_frames:
que.get()
# push current results into queue
seg = copy.deepcopy(frame_tar_avg)
que.put([feat_tar, seg])
# upsampling & argmax
frame_tar_avg = F.interpolate(frame_tar_avg, scale_factor=args.patch_size, mode='bilinear', align_corners=False, recompute_scale_factor=False)[0]
frame_tar_avg = norm_mask(frame_tar_avg)
_, frame_tar_seg = torch.max(frame_tar_avg, dim=0)
# saving to disk
frame_tar_seg = np.array(frame_tar_seg.squeeze().cpu(), dtype=np.uint8)
frame_tar_seg = np.array(Image.fromarray(frame_tar_seg).resize((ori_w, ori_h), 0))
frame_nm = frame_list[cnt].split('/')[-1].replace(".jpg", ".png")
imwrite_indexed(os.path.join(video_folder, frame_nm), frame_tar_seg, color_palette)
def restrict_neighborhood(h, w):
# We restrict the set of source nodes considered to a spatial neighborhood of the query node (i.e. ``local attention'')
mask = torch.zeros(h, w, h, w)
for i in range(h):
for j in range(w):
for p in range(2 * args.size_mask_neighborhood + 1):
for q in range(2 * args.size_mask_neighborhood + 1):
if i - args.size_mask_neighborhood + p < 0 or i - args.size_mask_neighborhood + p >= h:
continue
if j - args.size_mask_neighborhood + q < 0 or j - args.size_mask_neighborhood + q >= w:
continue
mask[i, j, i - args.size_mask_neighborhood + p, j - args.size_mask_neighborhood + q] = 1
mask = mask.reshape(h * w, h * w)
return mask.cuda(non_blocking=True)
def norm_mask(mask):
c, h, w = mask.size()
for cnt in range(c):
mask_cnt = mask[cnt,:,:]
if(mask_cnt.max() > 0):
mask_cnt = (mask_cnt - mask_cnt.min())
mask_cnt = mask_cnt/mask_cnt.max()
mask[cnt,:,:] = mask_cnt
return mask
def label_propagation(args, model, frame_tar, list_frame_feats, list_segs, mask_neighborhood=None):
"""
propagate segs of frames in list_frames to frame_tar
"""
## we only need to extract feature of the target frame
feat_tar, h, w = extract_feature(model, frame_tar, return_h_w=True)
return_feat_tar = feat_tar.T # dim x h*w
ncontext = len(list_frame_feats)
feat_sources = torch.stack(list_frame_feats) # nmb_context x dim x h*w
feat_tar = F.normalize(feat_tar, dim=1, p=2)
feat_sources = F.normalize(feat_sources, dim=1, p=2)
feat_tar = feat_tar.unsqueeze(0).repeat(ncontext, 1, 1)
aff = torch.exp(torch.bmm(feat_tar, feat_sources) / 0.1) # nmb_context x h*w (tar: query) x h*w (source: keys)
if args.size_mask_neighborhood > 0:
if mask_neighborhood is None:
mask_neighborhood = restrict_neighborhood(h, w)
mask_neighborhood = mask_neighborhood.unsqueeze(0).repeat(ncontext, 1, 1)
aff *= mask_neighborhood
aff = aff.transpose(2, 1).reshape(-1, h * w) # nmb_context*h*w (source: keys) x h*w (tar: queries)
tk_val, _ = torch.topk(aff, dim=0, k=args.topk)
tk_val_min, _ = torch.min(tk_val, dim=0)
aff[aff < tk_val_min] = 0
aff = aff / torch.sum(aff, keepdim=True, axis=0)
list_segs = [s.cuda() for s in list_segs]
segs = torch.cat(list_segs)
nmb_context, C, h, w = segs.shape
segs = segs.reshape(nmb_context, C, -1).transpose(2, 1).reshape(-1, C).T # C x nmb_context*h*w
seg_tar = torch.mm(segs, aff)
seg_tar = seg_tar.reshape(1, C, h, w)
return seg_tar, return_feat_tar, mask_neighborhood
def extract_feature(model, frame, return_h_w=False):
"""Extract one frame feature everytime."""
out = model.get_intermediate_layers(frame.unsqueeze(0).cuda(), n=1)[0]
out = out[:, 1:, :] # we discard the [CLS] token
h, w = int(frame.shape[1] / model.patch_embed.patch_size), int(frame.shape[2] / model.patch_embed.patch_size)
dim = out.shape[-1]
out = out[0].reshape(h, w, dim)
out = out.reshape(-1, dim)
if return_h_w:
return out, h, w
return out
def imwrite_indexed(filename, array, color_palette):
""" Save indexed png for DAVIS."""
if np.atleast_3d(array).shape[2] != 1:
raise Exception("Saving indexed PNGs requires 2D array.")
im = Image.fromarray(array)
im.putpalette(color_palette.ravel())
im.save(filename, format='PNG')
def to_one_hot(y_tensor, n_dims=None):
"""
Take integer y (tensor or variable) with n dims &
convert it to 1-hot representation with n+1 dims.
"""
if(n_dims is None):
n_dims = int(y_tensor.max()+ 1)
_,h,w = y_tensor.size()
y_tensor = y_tensor.type(torch.LongTensor).view(-1, 1)
n_dims = n_dims if n_dims is not None else int(torch.max(y_tensor)) + 1
y_one_hot = torch.zeros(y_tensor.size()[0], n_dims).scatter_(1, y_tensor, 1)
y_one_hot = y_one_hot.view(h,w,n_dims)
return y_one_hot.permute(2, 0, 1).unsqueeze(0)
def read_frame_list(video_dir):
frame_list = [img for img in glob.glob(os.path.join(video_dir,"*.jpg"))]
frame_list = sorted(frame_list)
return frame_list
def read_frame(frame_dir, scale_size=[480]):
"""
read a single frame & preprocess
"""
img = cv2.imread(frame_dir)
ori_h, ori_w, _ = img.shape
if len(scale_size) == 1:
if(ori_h > ori_w):
tw = scale_size[0]
th = (tw * ori_h) / ori_w
th = int((th // 64) * 64)
else:
th = scale_size[0]
tw = (th * ori_w) / ori_h
tw = int((tw // 64) * 64)
else:
th, tw = scale_size
img = cv2.resize(img, (tw, th))
img = img.astype(np.float32)
img = img / 255.0
img = img[:, :, ::-1]
img = np.transpose(img.copy(), (2, 0, 1))
img = torch.from_numpy(img).float()
img = color_normalize(img)
return img, ori_h, ori_w
def read_seg(seg_dir, factor, scale_size=[480]):
seg = Image.open(seg_dir)
_w, _h = seg.size # note PIL.Image.Image's size is (w, h)
if len(scale_size) == 1:
if(_w > _h):
_th = scale_size[0]
_tw = (_th * _w) / _h
_tw = int((_tw // 64) * 64)
else:
_tw = scale_size[0]
_th = (_tw * _h) / _w
_th = int((_th // 64) * 64)
else:
_th = scale_size[1]
_tw = scale_size[0]
small_seg = np.array(seg.resize((_tw // factor, _th // factor), 0))
small_seg = torch.from_numpy(small_seg.copy()).contiguous().float().unsqueeze(0)
return to_one_hot(small_seg), np.asarray(seg)
def color_normalize(x, mean=[0.485, 0.456, 0.406], std=[0.228, 0.224, 0.225]):
for t, m, s in zip(x, mean, std):
t.sub_(m)
t.div_(s)
return x
if __name__ == '__main__':
parser = argparse.ArgumentParser('Evaluation with video object segmentation on DAVIS 2017')
parser.add_argument('--pretrained_weights', default='', type=str, help="Path to pretrained weights to evaluate.")
parser.add_argument('--arch', default='vit_small', type=str,
choices=['vit_tiny', 'vit_small', 'vit_base'], help='Architecture (support only ViT atm).')
parser.add_argument('--patch_size', default=16, type=int, help='Patch resolution of the model.')
parser.add_argument("--checkpoint_key", default="teacher", type=str, help='Key to use in the checkpoint (example: "teacher")')
parser.add_argument('--output_dir', default=".", help='Path where to save segmentations')
parser.add_argument('--data_path', default='/path/to/davis/', type=str)
parser.add_argument("--n_last_frames", type=int, default=7, help="number of preceeding frames")
parser.add_argument("--size_mask_neighborhood", default=12, type=int,
help="We restrict the set of source nodes considered to a spatial neighborhood of the query node")
parser.add_argument("--topk", type=int, default=5, help="accumulate label from top k neighbors")
parser.add_argument("--bs", type=int, default=6, help="Batch size, try to reduce if OOM")
args = parser.parse_args()
print("git:\n {}\n".format(utils.get_sha()))
print("\n".join("%s: %s" % (k, str(v)) for k, v in sorted(dict(vars(args)).items())))
# building network
model = vits.__dict__[args.arch](patch_size=args.patch_size, num_classes=0)
print(f"Model {args.arch} {args.patch_size}x{args.patch_size} built.")
model.cuda()
utils.load_pretrained_weights(model, args.pretrained_weights, args.checkpoint_key, args.arch, args.patch_size)
for param in model.parameters():
param.requires_grad = False
model.eval()
color_palette = []
for line in urlopen("https://raw.githubusercontent.com/Liusifei/UVC/master/libs/data/palette.txt"):
color_palette.append([int(i) for i in line.decode("utf-8").split('\n')[0].split(" ")])
color_palette = np.asarray(color_palette, dtype=np.uint8).reshape(-1,3)
video_list = open(os.path.join(args.data_path, "ImageSets/2017/val.txt")).readlines()
for i, video_name in enumerate(video_list):
video_name = video_name.strip()
print(f'[{i}/{len(video_list)}] Begin to segmentate video {video_name}.')
video_dir = os.path.join(args.data_path, "JPEGImages/480p/", video_name)
frame_list = read_frame_list(video_dir)
seg_path = frame_list[0].replace("JPEGImages", "Annotations").replace("jpg", "png")
first_seg, seg_ori = read_seg(seg_path, args.patch_size)
eval_video_tracking_davis(args, model, frame_list, video_dir, first_seg, seg_ori, color_palette)