Miscellaneous build oddities

[RichardBruskiewich]

1. In working with the project, one notices a fair number of errors reported in the docker-compose build log. It is hard to say which are worth worrying about. A survey of the error messages can be crudely extracted by:

     docker-compose logs |grep -i error
   

I wonder if we may wish to do a more careful audit of the build process to see what can be cleaned up.

2. It is unclear how best to robust reboot the system. Even after a (relatively) successful power up sequence, attempting restarting of the Tripal container (alone), i.e.

     docker-compose restart tripal
   

goes partway then hits fails with an exit code of 1.

Bring the whole system "down" first, then rebooting it in sequence is a bit time consuming.