4.2.9 bump, update_organism bugfix

galaxy-genome-annotation · Sep 4, 2020 · 0d30799 · 0d30799
1 parent 3cc6145
commit 0d30799
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Showing 3 changed files with 8 additions and 3 deletions.
diff --git a/README.rst b/README.rst
@@ -85,6 +85,8 @@ Or with the Arrow client:
 History
 -------
 
+- 4.2.9
+    - Bugfix to  update_organism when using suppress_output
 - 4.2.8
     - Added --suppress_output to update_organism
 - 4.2.7

diff --git a/apollo/organisms/__init__.py b/apollo/organisms/__init__.py
@@ -125,8 +125,11 @@ def update_organism(self, organism_id, common_name, directory, blatdb=None, spec
         if suppress_output is not None and suppress_output is True:
             data['returnAllOrganisms'] = False
 
-        response = self.post('updateOrganismInfo', data)[0]
-
+        if suppress_output:
+            response = self.post('updateOrganismInfo', data)
+        else:
+            response = self.post('updateOrganismInfo', data)[0]
+
         if len(response.keys()) == 0:
             return self.show_organism(organism_id)
         return response

diff --git a/setup.py b/setup.py
@@ -16,7 +16,7 @@
 
 setup(
     name="apollo",
-    version='4.2.8',
+    version='4.2.9',
     description="Apollo API library",
     long_description=readme,
     author="Helena Rasche;Anthony Bretaudeau;Nathan Dunn",
-Original file line number
+Diff line change
@@ Expand Up / @@ -85,6 +85,8 @@ Or with the Arrow client: @@
     History
     -------
+    - 4.2.9
+        - Bugfix to  update_organism when using suppress_output
     - 4.2.8
         - Added --suppress_output to update_organism
     - 4.2.7
@@ Expand Down @@