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Merge pull request #54 from galaxy-genome-annotation/req_update
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Be less strict on requirements
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abretaud authored Jun 7, 2021
2 parents 20e26ba + 2f257dd commit c467795
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Showing 2 changed files with 3 additions and 3 deletions.
2 changes: 1 addition & 1 deletion bootstrap_apollo.sh
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ export ARROW_GLOBAL_CONFIG_PATH GALAXY_SHARED_DIR
mkdir -p "$GALAXY_SHARED_DIR"

if ! [[ $SHOULD_LAUNCH_DOCKER -eq 0 ]]; then
docker run --memory=4g -d -p 8888:8080 -v `pwd`/apollo_shared_dir/:/data/ -e "WEBAPOLLO_DEBUG=true" quay.io/gmod/apollo:latest
docker run --memory=4g -d -p 8888:8080 -v `pwd`/apollo_shared_dir/:/data/ -e "WEBAPOLLO_DEBUG=true" gmod/apollo:latest
fi

echo "[BOOTSTRAP] Waiting while Apollo starts up..."
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4 changes: 2 additions & 2 deletions requirements.txt
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
requests
biopython==1.77
biopython>=1.77
cachetools<4
click>=6.7
wrapt
pyyaml
decorator
bcbio-gff==0.6.6
bcbio-gff>=0.6.6

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