diff --git a/bootstrap_apollo.sh b/bootstrap_apollo.sh index cb73254..5adb27a 100755 --- a/bootstrap_apollo.sh +++ b/bootstrap_apollo.sh @@ -31,7 +31,7 @@ export ARROW_GLOBAL_CONFIG_PATH GALAXY_SHARED_DIR mkdir -p "$GALAXY_SHARED_DIR" if ! [[ $SHOULD_LAUNCH_DOCKER -eq 0 ]]; then - docker run --memory=4g -d -p 8888:8080 -v `pwd`/apollo_shared_dir/:/data/ -e "WEBAPOLLO_DEBUG=true" quay.io/gmod/apollo:latest + docker run --memory=4g -d -p 8888:8080 -v `pwd`/apollo_shared_dir/:/data/ -e "WEBAPOLLO_DEBUG=true" gmod/apollo:latest fi echo "[BOOTSTRAP] Waiting while Apollo starts up..." diff --git a/requirements.txt b/requirements.txt index 2447cba..9b7e3ce 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,8 +1,8 @@ requests -biopython==1.77 +biopython>=1.77 cachetools<4 click>=6.7 wrapt pyyaml decorator -bcbio-gff==0.6.6 +bcbio-gff>=0.6.6