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MNT,FIX test code on python 3.11, fix matplotlib register cmap #283

MNT,FIX test code on python 3.11, fix matplotlib register cmap

MNT,FIX test code on python 3.11, fix matplotlib register cmap #283

Workflow file for this run

name: Run tests
on:
push:
branches:
- main
pull_request:
branches:
- main
jobs:
run-tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.7, 3.8, 3.9, "3.10", "3.11", "3.12"]
max-parallel: 5
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- uses: actions/cache@v4
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/setup.py') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Install dependencies
run: |
sudo apt-get update
sudo apt-get install -y inkscape
pip install --upgrade pip
pip install wheel numpy "cython<3.0"
# force using latest nibabel
pip install -U nibabel
pip install -e . --no-build-isolation
python -c 'import cortex; print(cortex.__full_version__)'
- name: Test with pytest
run: |
pip install -q pytest pytest-cov codecov
pytest --cov=./
- name: Run codecov
run: |
codecov