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codemeta.json
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codemeta.json
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{
"@context": "https://w3id.org/codemeta/3.0",
"type": "SoftwareSourceCode",
"applicationCategory": "Biology",
"author": [
{
"id": "https://orcid.org/ 0000-0002-0220-0482",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics HUB, Paris, France "
},
"email": "[email protected]",
"familyName": "Néron",
"givenName": "Bertrand"
},
{
"id": "https://orcid.org/ 0000-0002-5231-3346",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": " Univ. Grenoble Alpes, CNRS, UMR 5525, VetAgro Sup, Grenoble INP, TIMC, 38000 Grenoble, France "
},
"email": "[email protected]",
"familyName": "Abby",
"givenName": "Sophie"
},
{
"id": "https://orcid.org/ 0000-0001-7704-822X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "[email protected]",
"familyName": "Rocha",
"givenName": "Eduardo"
}
],
"codeRepository": "https://github.com/gem-pasteur/macsyfinder",
"contributor": [
{
"id": "https://orcid.org/ 0000-0002-7552-1009",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics HUB, Paris, France "
},
"email": "[email protected]",
"familyName": "Ménager",
"givenName": "Hervé"
},
{
"id": "https://github.com/fjossandon",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Biome Makers Inc."
},
"email": "[email protected]",
"familyName": "Ossandon",
"givenName": "Franscisco J,"
},
{
"id": "https://orcid.org/0000-0003-2277-689X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "APC Microbiome Institute: Cork, IE "
},
"familyName": "Denise",
"givenName": "Rémi"
},
{
"id": "https://orcid.org/ 0000-0001-7389-447X",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "[email protected]",
"familyName": "Touchon",
"givenName": "Marie"
},
{
"id": "https://orcid.org/ 0000-0003-4797-6185",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France"
},
"email": "[email protected]",
"familyName": "Perrin",
"givenName": "Amandine"
},
{
"id": "https://orcid.org/ 0000-0002-0930-8920",
"type": "Person",
"affiliation": {
"type": "Organization",
"name": "Institut Pasteur, Université Paris Cité, SeqBio, Paris, France "
},
"email": "[email protected]",
"familyName": "Dufresne",
"givenName": "Yoann"
},
{
"id": "https://github.com/TrellixVulnTeam",
"type": "Person",
"email": "[email protected]",
"givenName": "TrellixVulnTeam"
}
],
"dateCreated": "2013-11-04",
"dateModified": "2024-07-30",
"datePublished": "2014-10-17",
"description": "MacSyFinder is a program to model and detect macromolecular systems, genetic pathways… in prokaryotes protein datasets.",
"downloadUrl": "https://pypi.org/project/MacSyFinder/",
"funder": {
"type": "Organization",
"name": "Institut Pasteur Paris"
},
"keywords": [
"bioinformatics",
"functional genomics",
"gene functional annotation"
],
"license": "https://spdx.org/licenses/GPL-3.0+",
"name": "macsyfinder",
"operatingSystem": [
"Linux",
"BSD",
"macOS"
],
"programmingLanguage": "Python",
"relatedLink": [
"https://pypi.org/project/MacSyFinder/",
"https://hub.docker.com/r/gempasteur/macsyfinder"
],
"softwareRequirements": [
"Python >= 3.10",
"hmmer >= 3.1"
],
"version": "2.1.4",
"codemeta:contIntegration": {
"id": "https://github.com/gem-pasteur/macsyfinder/actions"
},
"continuousIntegration": "https://github.com/gem-pasteur/macsyfinder/actions",
"developmentStatus": "active",
"issueTracker": "https://github.com/gem-pasteur/macsyfinder/issues",
"referencePublication": "https://doi.org/10.24072/pcjournal.250"
}