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[JOSS REVIEW] Minor edits to the github-based documentation #81

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friedue opened this issue Sep 15, 2021 · 3 comments
Open
2 tasks

[JOSS REVIEW] Minor edits to the github-based documentation #81

friedue opened this issue Sep 15, 2021 · 3 comments
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@apldx

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@friedue
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friedue commented Sep 15, 2021

  • extend the commands for the installation
git clone https://github.com/genome/bam-readcount 
cd bam-readcount
mkdir build
cd build
cmake ..
make
@friedue friedue mentioned this issue Sep 15, 2021
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@bebatut
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bebatut commented Sep 20, 2021

It could also be added that bam-readcount can be installed via conda and then give some instruction

apldx added a commit that referenced this issue Sep 30, 2021
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Update with JOSS review suggestions #81
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apldx commented Sep 30, 2021

Good suggestion, @friedue, done. @bebatut, also a great idea about conda, but we will need to update our conda recipe for the new version (looks like it's currently at v0.8 in bioconda), so leaving this open for now.

@apldx apldx self-assigned this Sep 30, 2021
@ccwang002
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Bioconda is now able to build the latest version of bam-readcount (v1.0.1) bioconda/bioconda-recipes#47911

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@apldx @ccwang002 @bebatut @friedue