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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["hatchling", "hatch-vcs"]
build-backend = "hatchling.build"
[project]
name = "pydmdstats"
version = "0.1.0"
requires-python = ">=3.8, <3.13"
description = "VarProDMD stats vs BOPDMD"
license = {file="LICENSE"}
authors = [
{ name = "Gerhard Reinerth", email = "[email protected]" }
]
readme = "README.md"
keywords = ["python", "dynamic mode decomposition", "variable projection"]
classifiers = [
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering",
"License :: OSI Approved :: MIT License",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12"
]
dependencies = [
"numpy>=1.21.4",
"pydmd",
"jax",
"jaxlib",
"SciencePlots",
"scikit-image"
]
[project.optional-dependencies]
test = [
"pytest >=6",
"pytest-cov >=3",
"nox"
]
experiments = [
"seaborn",
"netCDF4",
"wget",
"tqdm",
"h5py",
"pyvista"
]
cuda =[
"jax[cuda12]"
]
dev = ["anybadge",
"ruff",
"pytest",
"pytest-coverage",
"pytest-mypy",
"hatchling",
"nox",
"pre-commit"]
docs = [
"sphinx>=7.0",
"myst_parser>=0.13",
"sphinx_copybutton",
"sphinx_autodoc_typehints",
"furo>=2023.08.17"
]
[tool.hatch]
version.source = "vcs"
build.hooks.vcs.version-file = "varprodmdstatspy/_version.py"
build.include = [
"varprodmdstatspy",
"experiments",
"visualization"
]
[tool.coverage]
run.source = ["varprodmdstatspy"]
report.exclude_also = [
'\.\.\.',
'if typing.TYPE_CHECKING:',
]
[tool.mypy]
files = ["varprodmdstatspy", "tests"]
python_version = "3.8"
warn_unused_configs = true
strict = true
enable_error_code = ["ignore-without-code", "redundant-expr", "truthy-bool"]
warn_unreachable = true
disallow_untyped_defs = false
disallow_incomplete_defs = false
ignore_missing_imports = true
[[tool.mypy.overrides]]
module = "varprodmdstatspy.*"
disallow_untyped_defs = true
disallow_incomplete_defs = true
[tool.ruff]
src = ["varprodmdstatspy"]
[tool.ruff.lint]
extend-select = [
"B", # flake8-bugbear
"I", # isort
"ARG", # flake8-unused-arguments
"C4", # flake8-comprehensions
"EM", # flake8-errmsg
"ICN", # flake8-import-conventions
"G", # flake8-logging-format
"PGH", # pygrep-hooks
"PIE", # flake8-pie
"PL", # pylint
"PT", # flake8-pytest-style
"PTH", # flake8-use-pathlib
"RET", # flake8-return
"RUF", # Ruff-specific
"SIM", # flake8-simplify
"T20", # flake8-print
"UP", # pyupgrade
"YTT", # flake8-2020
"EXE", # flake8-executable
"NPY", # NumPy specific rules
"PD", # pandas-vet
]
ignore = [
"PLR09", # Too many <...>
"PLR2004", # Magic value used in comparison
"ISC001", # Conflicts with formatter
]
isort.required-imports = ["from __future__ import annotations"]
# Uncomment if using a _compat.typing backport
# typing-modules = ["varprodmdstatspy._compat.typing"]
[tool.ruff.lint.per-file-ignores]
"tests/**" = ["T20"]
"noxfile.py" = ["T20"]
[tool.pylint]
py-version = "3.8"
ignore-paths = [".*/_version.py"]
reports.output-format = "colorized"
similarities.ignore-imports = "yes"
messages_control.disable = [
"design",
"fixme",
"line-too-long",
"missing-module-docstring",
"missing-function-docstring",
"wrong-import-position",
]
[project.scripts]
pdebench_dl = "experiments.util.pdebench_data_download:pdebench_downdload"
velocity2vorticity = "experiments.util.convert2vorticity:convert_velocity"
run_ssim = "experiments.varprodmd_ssim_performance:run_ssim"
run_mrse = "experiments.varprodmd_mrse_performance:run_mrse"
run_3dcfd = "experiments.varprodmd_3dcfd:run_3dcfd"
visualize_stats = "visualization.visualize_results:visualize_stats"
visualize_3dcfd_results = "visualization.visualize_3dcfd_results:visualize_results"