GitHub - grendon/iforgeGenomeGPS: version of MayoGenomeGPS for the iforge system at NCSA

grendon / iforgeGenomeGPS Public

version of MayoGenomeGPS for the iforge system at NCSA

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
config		config
README2		README2
VERSION		VERSION
alignew2.sh		alignew2.sh
bam2fastq.sh		bam2fastq.sh
bwaS1.sh		bwaS1.sh
bwaS2.sh		bwaS2.sh
bwaS3.sh		bwaS3.sh
checkFastqQualityScores.pl		checkFastqQualityScores.pl
epilogue.sh		epilogue.sh
extract_reads_bam.sh		extract_reads_bam.sh
fastq.sh		fastq.sh
layer3.sh		layer3.sh
main2.sh		main2.sh
mergebams.sh		mergebams.sh
mergenodes.sh		mergenodes.sh
mergenovo.sh		mergenovo.sh
mergepicard.sh		mergepicard.sh
novosplit.sh		novosplit.sh
realign.sh		realign.sh
realign_extra.sh		realign_extra.sh
realrecalold.sh		realrecalold.sh
snvmix_to_vcf.pl		snvmix_to_vcf.pl
sortbammayo.sh		sortbammayo.sh
sortmergeMAYO.sh		sortmergeMAYO.sh
sortnode.sh		sortnode.sh
summary.sh		summary.sh
vcallgatk.sh		vcallgatk.sh