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Fix docs typos
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susannasiebert committed Jul 1, 2024
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4 changes: 2 additions & 2 deletions docs/ref_transcript_mismatch_reporter.rst
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Expand Up @@ -19,7 +19,7 @@ cannot make predictions on such variants.
Such errors might occur in a small number of variants if there are only minor
differences between the reference used and the Ensembl transcripts but they
might also be more widespread, for example, if users aligned to GRCh37 but
used a GRCh38 VEP cachce.
used a GRCh38 VEP cache.

The input VCF needs to be annotated by VEP and requires annotation with the
``Wildtype`` VEP plugin available as part of `pVACtools <https://pvactools.readthedocs.io/en/latest/pvacseq/input_file_prep/vep.html#installing-vep>`_.
Expand Down Expand Up @@ -47,4 +47,4 @@ Example Command

.. code-block:: none
csq-mismatch-report input.vcf --filter soft
ref-transcript-mismatch-report input.vcf --filter soft

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