-
Notifications
You must be signed in to change notification settings - Fork 1
/
index.html
161 lines (146 loc) · 6.63 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
<!DOCTYPE html>
<html>
<head>
<meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1" />
<meta name="google-site-verification" content="7eDjHMCU1NQK0HwCiHV-Y6E9pfOe8JkAc49dcdl3mWc" />
<meta charset="UTF-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>AML31 Supplementary Information</title>
<link rel="shortcut icon" href="http://genome.wustl.edu/workspace/images/favicon.ico" type="image/x-icon" />
<link rel="stylesheet" type="text/css" href="main.css" />
</head>
<body class="home">
<div class="navbar">
<div class="navbar-inner">
<div class="row helix">
<img src="tgi_logo_shadow.png" title="The Genome McDonnell Institute at Washington Unversity School of Medicine" alt="The McDonnell Genome Institute at Washington Unversity School of Medicine" style="float:left;margin-left:25px;"/>
<div class="span8 menu">
<div class="nav-collapse">
<ul class="nav">
<li>
<a href="index.html">Main</a>
</li>
<li>
<a href="sequence.html">Sequence Data</a>
</li>
<li>
<a href="methods.html">Methods</a>
</li>
<li>
<a href="analyses.html">Analyses</a>
</li>
<li>
<a href="tools.html">Tools</a>
</li>
<li>
<a href="citation.html">Citation</a>
</li>
</ul>
</div>
</div>
</div>
</div>
</div>
<div class="container background">
<div class="row">
<div class="aml31top">
<p><b>Sequence data, analyses, and resources related to the ultra-deep sequencing of the AML31 tumor, relapse, and matched normal.</b></p>
</div>
</div>
<div class="indexspan4 main-block publications">
<a href="sequence.html"><div class="block-padding">
<h2>Sequence Data</h2>
<img class="indeximg" src="sequence.png" />
</div></a>
</div>
<div class="indexspan4 main-block people">
<a href="methods.html"><div class="block-padding">
<h2>Methods</h2>
<img class="indeximg" src="methods.png" />
</div></a>
</div>
<div class="indexspan4 main-block genomes">
<a href="analyses.html"><div class="block-padding">
<h2>Analyses</h2>
<img class="indeximg" src="analyses.png" />
</div></a>
</div>
<div class="indexspan4 main-block projects">
<a href="tools.html"><div class="block-padding">
<h2>Tools</h2>
<img class="indeximg" src="tools.png" />
</div></a>
</div>
<div class="row"></div>
<div class="row">
<div class="aml31bottom">
<p>This website is maintained as a GitHub repository <a href="https://github.com/chrisamiller/aml31SuppSite">here.</a><br><br> Almost 3 terabases of sequence data was produced from the tumor samples of a single AML case, including <b>>300x whole genome coverage</b> of the primary tumor sample. <br><br>These data are archived in dbGaP under accession id <a href="http://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000159">phs000159</a>. An inventory of submitted files is available here: <a href="AML31_DBGAP_Submission_Info.xlsx">AML31_DBGAP_Submission_Info.xlsx</a>. For further details refer to the <a href="sequence.html">sequence</a> page.<br><br><b>Citation:</b> Malachi Griffith*, Christopher A. Miller*, Obi L. Griffith, Kilannin Krysiak, Zachary L. Skidmore, Avinash Ramu, Jason R. Walker, Ha X. Dang, Lee Trani, David E. Larson, Ryan T. Demeter, Michael C. Wendl, Joshua F. McMichael, Rachel E. Austin, Vincent Magrini, Sean D. McGrath, Amy Ly, Shashikant Kulkarni, Matthew G. Cordes, Catrina C. Fronick, Robert S. Fulton, Christopher A. Maher, Li Ding, Jeffery M. Klco10, Elaine R. Mardis, Timothy J. Ley, Richard K. Wilson. <a href="http://www.cell.com/cell-systems/abstract/S2405-4712(15)00113-1">Optimizing Cancer Genome Sequencing and Analysis</a>. Cell Systems.</p><br>
</div>
</div>
</div>
<div class="container footer">
<div class="row">
<div class="span11 social-links" style="display: inline-block;">
<ul>
<li>
<a href="http://www.facebook.com/pages/The-Genome-Institute-at-Washington-University/107175642653384?ref=ts">
<img src="logos/facebook.png" width="32" height="32" />
</a>
</li>
<li>
<a href="http://www.flickr.com/photos/genomeinstitute/">
<img src="logos/flickr.png" width="32" height="32" />
</a>
</li>
<li>
<a href="https://plus.google.com/108141467205273112477">
<img src="logos/google_plus.png" width="32" height="32" />
</a>
</li>
<li>
<a href="http://www.linkedin.com/groups?gid=3113357">
<img src="logos/linkedin.png" width="32" height="32" />
</a>
</li>
<li>
<a href="http://www.twitter.com/GenomeInstitute">
<img src="logos/twitter.png" width="32" height="32" />
</a>
</li>
<li>
<a href="http://en.wikipedia.org/wiki/The_Genome_Institute">
<img src="logos/wikipedia.png" width="32" height="32" />
</a>
</li>
<li>
<a href="http://www.youtube.com/user/TheGenomeinstitute">
<img src="logos/youtube.png" width="32" height="32" />
</a>
</li>
<li>
<a href="/rss">
<img src="logos/rss_icon.png" width="32" height="32" />
</a>
</li>
</ul>
<br />
<br />
</div>
</div>
</div>
<div class="container copyright">
<div class="row">
<div class="span12">
<span class="copyright">
Copyright © 1993-2014 Washington University in St. Louis. All rights reserved.
</span>
<span class="wustl-logo">
<a href="http://medschool.wustl.edu/">
<img src="logos/wustl-med-school-logo.svg" width="260" height="37" title="Washington University School of Medicine" alt="Washington University School of Medicine" />
</a>
</span>
</div>
</div>
</div>
</body>
</html>