Meta issue: sources lacking a corresponding query in the queries module

[kkaris]

These sources and their listed relationship types and/or node labels are partially or completely missing from the queries module. * indicates that the relationship type exists partially in the query module but that it's usage does not cover 100 % of the available 'query space' (e.g., limited to a specific prefix or direction) in the queries module.

Source/Processor	Description	Node Label(s)	Relationship type	Additional Notes
cellmarker CellMarkerProcessor	Connects cell types to their genetic markers	BioEntity	has_marker	Lists uberon IDs, experimental markers and PMIDs per relation
wikidata JournalPublisherProcessor	Connects journals to publishers	Journal, Publisher	published_by
pubmed JournalProcessor	Connects Publication to Journal	Publication, Journal	published_in
disgenet DisgenetProcessor	Connects genes to diseases	BioEntity	gene_disease_association
disgenet DisgenetProcessor	Connects variants to diseases	BioEntity	variant_disease_association
disgenet DisgenetProcessor	Connects variants to genes	BioEntity	variant_gene_association
nih_reporter NihReporterProcessor	Connects NIH Research Project to a Publication	ResearchProject, Publictation	has_publication
nih_reporter NihReporterProcessor	Connects NIH Research Project to a ClinicalTrial	ResearchProject, ClinicalTrial	has_clinical_trial
nih_reporter NihReporterProcessor	Connects NIH Research Project to a Google Patent	Patent	has_patent
interpro InterproProcessor	Connects protein domains to their associated genes	BioEntity	has_domain
interpro InterproProcessor	Connects protein domains to their associated GO terms	BioEntity	associated_with	*associated_with is already used in the queries module for hgnc-GO connections, skip for now
indra_ontology OntologyProcessor	Connects a deprecated term to its replacement	BioEntity	replaced_by	Probably not interesting, skip for now
indra_ontology OntologyProcessor	Connects a term to a cross-reference	BioEntity	xref	Probably not interesting, skip for now
hpoa HpDiseasePhenotypeProcessor	Connects diseases with phenotypes from HPOA	BioEntity	has_phenotype	Lists evidence codes per relationship
hpoa HpPhenotypeGeneProcessor	Connects phenotypes with genes	BioEntity	phenotype_has_gene
gwas GWASProcessor	Connects gene variant with phenotype	BioEntity	variant_phenotype_association
cbioportal CcleMutationsProcessor	Connects gene with mutations	BioEntity	mutated_in	*No query to get genes for a specific mutation (maybe this is uninteresting)
cbioportal CcleCnaProcessor	Connect gene with cell line where copy number altered	BioEntity	copy_number_altered_in
cbioportal CcleDrugResponseProcessor	Connects cell line with drug its sensitive	BioEntity	sensitive_to
chembl ChemblIndicationsProcessor	Connects small molecules with drug indications	BioEntity	has_indication
depmap DepMapProcessor	Connects genes with their logp score from DepMap	BioEntity	codependent_with	Not yet in database
ec HGNCEnzymeProcessor	Connects enzymes with their associated genes	BioEntity	has_activity