run-tests.yml

name: Checks
concurrency:
  group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }}
  cancel-in-progress: true

on: [push, pull_request]

jobs:
  check-doc:
    name: Doc consistency and codespell
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -l {0}
    steps:
    - uses: actions/checkout@v4
    - uses: actions/setup-python@v5
      with:
        python-version: "3.11"
    - run: pip install --upgrade pip
    - run: pip install -ve .[tests] codespell tomli
    - run: make codespell-error
    - run: pytest mne_bids_pipeline -m "not dataset_test"
    - uses: codecov/codecov-action@v4
      if: success()
      name: 'Upload coverage to CodeCov'
  caching:
    name: 'Caching on ${{ matrix.os }}'
    timeout-minutes: 30
    continue-on-error: true
    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash -el {0}
    strategy:
      matrix:
        include:
          - os: ubuntu-latest
          - os: macos-latest
          - os: windows-latest
    env:
      MNE_BIDS_PIPELINE_LEGACY_WINDOWS: "false"
      PYTHONIOENCODING: 'utf8'  # for Windows
    steps:
      - uses: actions/checkout@v4
      - uses: pyvista/setup-headless-display-action@main
        with:
          qt: true
          pyvista: false
      - uses: actions/setup-python@v5
        with:
          python-version: "3.11"  # no "multidict" wheels on 3.12 yet
      - run: pip install -ve .[tests]
      - uses: actions/cache@v4
        with:
          key: ds001971
          path: ~/mne_data/ds001971
        id: ds001971-cache
      - run: python -m mne_bids_pipeline._download ds001971
        if: steps.ds001971-cache.outputs.cache-hit != 'true'
      - run: pytest --cov-append -k ds001971 mne_bids_pipeline/
      - run: pytest --cov-append -k ds001971 mne_bids_pipeline/  # uses "hash" method
        timeout-minutes: 1
      - uses: actions/cache@v4
        with:
          key: ds003392
          path: ~/mne_data/ds003392
        id: ds003392-cache
      - run: python -m mne_bids_pipeline._download ds003392
        if: steps.ds003392-cache.outputs.cache-hit != 'true'
      - run: pytest --cov-append -k ds003392 mne_bids_pipeline/
      - run: pytest --cov-append -k ds003392 mne_bids_pipeline/  # uses "mtime" method
        timeout-minutes: 1
      - uses: codecov/codecov-action@v4
        if: success()