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Automated report
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@anitacaron
anitacaron committed Mar 14, 2022
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Binary file modified graphs/ccf_Eye_graph.png
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Binary file modified graphs/ccf_Knee_graph.png
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6 changes: 0 additions & 6 deletions logs/Knee_AS_CT_strict_log.tsv
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@@ -1,7 +1 @@
s slabel user_slabel o olabel user_olabel
CL:0000744 columnar chondrocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000743 hypertrophic chondrocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000137 osteocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000062 osteoblast UBERON:0009980 condyle of femur condyle of femur
CL:0000092 osteoclast UBERON:0009980 condyle of femur condyle of femur
CL:0007010 Preosteoblast UBERON:0009980 condyle of femur condyle of femur
1 change: 1 addition & 0 deletions logs/class_Eye_log.tsv
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Expand Up @@ -5,6 +5,7 @@ CL:0000750 OFF-bipolar cell OFF-bipolar cell UBERON:0001791 inner nuclear layer
CL:0000751 rod bipolar cell rod bipolar cell CL:0000749 ON-bipolar cell ON-bipolar cell
CL:0000751 rod bipolar cell rod bipolar cell UBERON:0001791 inner nuclear layer of retina inner nuclear layer of retina
UBERON:0002203 vasculature of eye vasculature of eye UBERON:0000966 retina retina
UBERON:0005336 capillary layer of choroid UBERON:0005336 capillary layer of choroid capillary layer of choroid
CL:0000573 retinal cone cell retinal cone cell UBERON:0001789 outer nuclear layer of retina outer nuclear layer of retina
CL:0002585 retinal blood vessel endothelial cell retinal blood vessel endothelial cell UBERON:0004864 vasculature of retina retinal vasculature
CL:0002228 primary lens fiber primary lens fiber UBERON:0002444 lens fiber lens fiber
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10 changes: 4 additions & 6 deletions logs/class_Knee_log.tsv
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Expand Up @@ -8,9 +8,7 @@ UBERON:0003668 Synovial Bursa synovial bursa UBERON:0001485 knee joint knee join
UBERON:0016400 Infrapatellar fat pad infrapatellar fat pad UBERON:0001485 knee joint knee joint
UBERON:0009980 condyle of femur condyle of femur UBERON:0001485 knee joint knee joint
UBERON:0010996 articular cartilage of joint Superior Articular Cartilage UBERON:0009984 medial condyle of femur medial condyle of femur
CL:0000744 columnar chondrocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000743 hypertrophic chondrocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000137 osteocyte UBERON:0009980 condyle of femur condyle of femur
CL:0000062 osteoblast UBERON:0009980 condyle of femur condyle of femur
CL:0000092 osteoclast UBERON:0009980 condyle of femur condyle of femur
CL:0007010 Preosteoblast UBERON:0009980 condyle of femur condyle of femur
UBERON:4000088 mineralized cartilage tissue mineralized cartilage tissue UBERON:0009980 condyle of femur condyle of femur
UBERON:0002483 trabecular bone tissue trabecular bone tissue UBERON:0009980 condyle of femur condyle of femur
UBERON:0006136 unmyelinated nerve fiber unmyelinated nerve fiber UBERON:0009980 condyle of femur condyle of femur
UBERON:0002371 bone marrow bone marrow UBERON:0009980 condyle of femur condyle of femur
1 change: 1 addition & 0 deletions logs/class_Small_intestine_indirect_log.tsv
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Expand Up @@ -3,3 +3,4 @@ UBERON:0002114 duodenum duodenum UBERON:0002108 Small Intestine small intestine
UBERON:0008346 duodenal epithelium duodenal epithelium UBERON:0000320 duodenal mucosa duodenal mucosa
UBERON:0015834 duodenum lamina propria duodenum lamina propria UBERON:0000320 duodenal mucosa duodenal mucosa
UBERON:0000400 jejunal epithelium jejunal epithelium UBERON:0000399 jejunal mucosa jejunal mucosa
UBERON:0008345 ileal epithelium ileal epithelium UBERON:0000331 ileal mucosa ileal mucosa
1 change: 1 addition & 0 deletions logs/class_Uterus_log.tsv
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Expand Up @@ -4,4 +4,5 @@ UBERON:0012276 endometrium glandular epithelium endometrium glandular epithelium
UBERON:0011949 endometrium luminal epithelium endometrium luminal epithelium UBERON:0002451 endometrial gland endometrial gland
UBERON:0002337 endometrial stroma endometrial stroma UBERON:0022355 basal layer of endometrium basal layer of endometrium
UBERON:0012332 broad ligament of uterus broad ligament of uterus UBERON:0000995 uterus uterus
UBERON:0002493 uterine artery uterine artery UBERON:0012332 broad ligament of uterus broad ligament of uterus
UBERON:0008889 uterine venous plexus uterine venous plexsus UBERON:0000995 uterus uterus
24 changes: 12 additions & 12 deletions logs/error_class_Blood.log
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Expand Up @@ -4,22 +4,22 @@ WARNING - No valid ID provided for '', label: CD4 T cell memory, user_label:
WARNING - No valid ID provided for '', label: CD4 T cell effector memory CD45RA, user_label:
WARNING - No valid ID provided for '', label: CD8 T cell memory, user_label:
WARNING - No valid ID provided for '', label: mature CD8 T cell, user_label:
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
WARNING - Different labels found for CL:0000084. Uberongraph: T cell ; ASCT+b table: T lymphocytes
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
WARNING - Different labels found for CL:0000775. Uberongraph: neutrophil ; ASCT+b table: neutrophilic granulocyte
WARNING - Different labels found for CL:0001058. Uberongraph: plasmacytoid dendritic cell, human ; ASCT+b table: Plasmacytoid Dendritic Cell (pDC)
WARNING - Different labels found for CL:0000900. Uberongraph: naive thymus-derived CD8-positive, alpha-beta T cell ; ASCT+b table: CD8 naïve
WARNING - Different labels found for CL:0001056. Uberongraph: dendritic cell, human ; ASCT+b table: dendritic cell (DC)
WARNING - Different labels found for CL:0002399. Uberongraph: CD1c-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 2 (DC2)
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
WARNING - Different labels found for CL:0001050. Uberongraph: effector CD8-positive, alpha-beta T cell ; ASCT+b table: CD8 T cell effector memory
WARNING - Different labels found for CL:0000814. Uberongraph: mature NK T cell ; ASCT+b table: NK lymphocytes
WARNING - Different labels found for CL:0000815. Uberongraph: regulatory T cell ; ASCT+b table: T regulatory
WARNING - Different labels found for CL:0002394. Uberongraph: CD141-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 1 (DC1)
WARNING - Different labels found for CL:0002399. Uberongraph: CD1c-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 2 (DC2)
WARNING - Different labels found for CL:0001062. Uberongraph: effector memory CD8-positive, alpha-beta T cell, terminally differentiated ; ASCT+b table: CD8 T cell effector memory CD45RA
WARNING - Different labels found for CL:0000938. Uberongraph: CD16-negative, CD56-bright natural killer cell, human ; ASCT+b table: CD56 bright Natural killer
WARNING - Different labels found for CL:0001058. Uberongraph: plasmacytoid dendritic cell, human ; ASCT+b table: Plasmacytoid Dendritic Cell (pDC)
WARNING - Different labels found for CL:0000824. Uberongraph: mature natural killer cell ; ASCT+b table: mature Natural killer
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
WARNING - Different labels found for CL:0001054. Uberongraph: CD14-positive monocyte ; ASCT+b table: CD14 monocyte
WARNING - Different labels found for CL:0000900. Uberongraph: naive thymus-derived CD8-positive, alpha-beta T cell ; ASCT+b table: CD8 naïve
WARNING - Different labels found for CL:0000840. Uberongraph: immature conventional dendritic cell ; ASCT+b table: transitional Dendritic Cell (tDC)
WARNING - Different labels found for CL:0002394. Uberongraph: CD141-positive myeloid dendritic cell ; ASCT+b table: dendritic cell type 1 (DC1)
WARNING - Different labels found for CL:0001062. Uberongraph: effector memory CD8-positive, alpha-beta T cell, terminally differentiated ; ASCT+b table: CD8 T cell effector memory CD45RA
WARNING - Different labels found for CL:0000818. Uberongraph: transitional stage B cell ; ASCT+b table: transitional B cell
WARNING - Different labels found for CL:0000084. Uberongraph: T cell ; ASCT+b table: T lymphocytes
WARNING - Different labels found for CL:0000945. Uberongraph: lymphocyte of B lineage ; ASCT+b table: B lineage
WARNING - Different labels found for CL:0001056. Uberongraph: dendritic cell, human ; ASCT+b table: dendritic cell (DC)
WARNING - Different labels found for CL:0002396. Uberongraph: CD14-low, CD16-positive monocyte ; ASCT+b table: CD16 monocyte
WARNING - Different labels found for CL:0000895. Uberongraph: naive thymus-derived CD4-positive, alpha-beta T cell ; ASCT+b table: CD4 naïve
WARNING - Different labels found for CL:0000824. Uberongraph: mature natural killer cell ; ASCT+b table: mature Natural killer
60 changes: 30 additions & 30 deletions logs/error_class_Blood_vasculature.log
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Expand Up @@ -674,44 +674,44 @@ WARNING - No valid ID provided for 'FMA:8618', label: right interlobar pulmonary
WARNING - No valid ID provided for 'FMA:68847', label: basal segmental arterial trunk of right lung, user_label: Trunk of right basal segmental artery
WARNING - No valid ID provided for 'FMA:8618', label: right interlobar pulmonary artery, user_label: Interlobar portion of right pulmonary artery
WARNING - No valid ID provided for 'FMA:8616', label: truncus anterior of right pulmonary artery, user_label: Trunk of right upper lobar artery
WARNING - Different labels found for UBERON:0001530. Uberongraph: common carotid artery plus branches ; ASCT+b table: common carotid artery
WARNING - Different labels found for UBERON:0003478. Uberongraph: vein of lower lip ; ASCT+b table: inferior labial vein
WARNING - Different labels found for UBERON:0004723. Uberongraph: interlobular artery ; ASCT+b table: interlobular renal artery
WARNING - Different labels found for UBERON:0001414. Uberongraph: median basilic vein ; ASCT+b table: median cubital vein
WARNING - Different labels found for UBERON:0035042. Uberongraph: middle temporal artery ; ASCT+b table: middle temporal artery #2
WARNING - Different labels found for UBERON:0006662. Uberongraph: musculo-phrenic vein ; ASCT+b table: musculophrenic vein
WARNING - Different labels found for UBERON:0034727. Uberongraph: vestibular bulb artery ; ASCT+b table: artery of bulb of vestibule
WARNING - Different labels found for UBERON:0004726. Uberongraph: vasa recta ; ASCT+b table: vasa recta of kidney
WARNING - Different labels found for UBERON:0004719. Uberongraph: kidney arcuate vein ; ASCT+b table: arcuate renal vein
WARNING - Different labels found for UBERON:0004688. Uberongraph: costo-cervical trunk ; ASCT+b table: costocervical trunk
WARNING - Different labels found for UBERON:0003471. Uberongraph: artery of lower lip ; ASCT+b table: inferior labial artery
WARNING - Different labels found for UBERON:0015173. Uberongraph: helicine branch of uterine artery ; ASCT+b table: arcuate artery of uterus
WARNING - Different labels found for UBERON:0001585. Uberongraph: anterior vena cava ; ASCT+b table: superior vena cava
WARNING - Different labels found for UBERON:0001552. Uberongraph: kidney arcuate artery ; ASCT+b table: arcuate renal artery
WARNING - Different labels found for UBERON:0002079. Uberongraph: left cardiac atrium ; ASCT+b table: left atrium
WARNING - Different labels found for UBERON:0004726. Uberongraph: vasa recta ; ASCT+b table: vasa recta of kidney
WARNING - Different labels found for UBERON:0002084. Uberongraph: heart left ventricle ; ASCT+b table: left ventricle
WARNING - Different labels found for UBERON:0001072. Uberongraph: posterior vena cava ; ASCT+b table: inferior vena cava
WARNING - Different labels found for UBERON:0004688. Uberongraph: costo-cervical trunk ; ASCT+b table: costocervical trunk
WARNING - Different labels found for UBERON:0003470. Uberongraph: artery of upper lip ; ASCT+b table: superior labial artery
WARNING - Different labels found for UBERON:0004723. Uberongraph: interlobular artery ; ASCT+b table: interlobular renal artery
WARNING - Different labels found for UBERON:0006662. Uberongraph: musculo-phrenic vein ; ASCT+b table: musculophrenic vein
WARNING - Different labels found for UBERON:0002078. Uberongraph: right cardiac atrium ; ASCT+b table: right atrium
WARNING - Different labels found for UBERON:0001530. Uberongraph: common carotid artery plus branches ; ASCT+b table: common carotid artery
WARNING - Different labels found for UBERON:0012187. Uberongraph: frontal artery ; ASCT+b table: supratrochlear artery
WARNING - Different labels found for UBERON:0006144. Uberongraph: medial plantar digital vein ; ASCT+b table: medial plantar vein
WARNING - Different labels found for UBERON:0003477. Uberongraph: vein of upper lip ; ASCT+b table: superior labial vein
WARNING - Different labels found for UBERON:0006958. Uberongraph: great vein of heart ; ASCT+b table: great cardiac vein
WARNING - Different labels found for UBERON:0004689. Uberongraph: naso-frontal vein ; ASCT+b table: nasofrontal vein
WARNING - Different labels found for UBERON:0002455. Uberongraph: common plantar digital arteries ; ASCT+b table: common plantar digital artery
WARNING - Different labels found for UBERON:0035547. Uberongraph: posterior ciliary vein ; ASCT+b table: vorticose vein
WARNING - Different labels found for UBERON:0001281. Uberongraph: hepatic sinusoid ; ASCT+b table: liver sinusoid
WARNING - Different labels found for UBERON:0010408. Uberongraph: ocular angle artery ; ASCT+b table: angular artery
WARNING - Different labels found for UBERON:0009887. Uberongraph: interlobar vein ; ASCT+b table: interlobar renal vein
WARNING - Different labels found for UBERON:0006144. Uberongraph: medial plantar digital vein ; ASCT+b table: medial plantar vein
WARNING - Different labels found for UBERON:0006958. Uberongraph: great vein of heart ; ASCT+b table: great cardiac vein
WARNING - Different labels found for UBERON:0003478. Uberongraph: vein of lower lip ; ASCT+b table: inferior labial vein
WARNING - Different labels found for UBERON:0006146. Uberongraph: dorsal digital artery of manus ; ASCT+b table: dorsal digital artery of hand
WARNING - Different labels found for UBERON:0001330. Uberongraph: pampiniform plexus ; ASCT+b table: pampiniform venous plexus
WARNING - Different labels found for UBERON:0001508. Uberongraph: arch of aorta ; ASCT+b table: aortic arch
WARNING - Different labels found for UBERON:0035547. Uberongraph: posterior ciliary vein ; ASCT+b table: vorticose vein
WARNING - Different labels found for UBERON:0014685. Uberongraph: pterygoid plexus ; ASCT+b table: pterygoid venous plexus
WARNING - Different labels found for UBERON:0003471. Uberongraph: artery of lower lip ; ASCT+b table: inferior labial artery
WARNING - Different labels found for UBERON:0006198. Uberongraph: dorsal intercostal artery ; ASCT+b table: supreme intercostal artery
WARNING - Different labels found for UBERON:0015173. Uberongraph: helicine branch of uterine artery ; ASCT+b table: arcuate artery of uterus
WARNING - Different labels found for UBERON:0002079. Uberongraph: left cardiac atrium ; ASCT+b table: left atrium
WARNING - Different labels found for UBERON:0002078. Uberongraph: right cardiac atrium ; ASCT+b table: right atrium
WARNING - Different labels found for UBERON:0001585. Uberongraph: anterior vena cava ; ASCT+b table: superior vena cava
WARNING - Different labels found for UBERON:0005168. Uberongraph: renal interlobular vein ; ASCT+b table: interlobular renal vein
WARNING - Different labels found for UBERON:0001395. Uberongraph: thoraco-acromial artery ; ASCT+b table: thoracoacromial artery
WARNING - Different labels found for UBERON:0001281. Uberongraph: hepatic sinusoid ; ASCT+b table: liver sinusoid
WARNING - Different labels found for UBERON:0001552. Uberongraph: kidney arcuate artery ; ASCT+b table: arcuate renal artery
WARNING - Different labels found for UBERON:0006146. Uberongraph: dorsal digital artery of manus ; ASCT+b table: dorsal digital artery of hand
WARNING - Different labels found for UBERON:0001531. Uberongraph: right common carotid artery plus branches ; ASCT+b table: right common carotid artery
WARNING - Different labels found for UBERON:0012187. Uberongraph: frontal artery ; ASCT+b table: supratrochlear artery
WARNING - Different labels found for UBERON:0010408. Uberongraph: ocular angle artery ; ASCT+b table: angular artery
WARNING - Different labels found for UBERON:0009885. Uberongraph: interlobar artery ; ASCT+b table: interlobar renal artery
WARNING - Different labels found for UBERON:0001536. Uberongraph: left common carotid artery plus branches ; ASCT+b table: left common carotid artery
WARNING - Different labels found for UBERON:0003470. Uberongraph: artery of upper lip ; ASCT+b table: superior labial artery
WARNING - Different labels found for UBERON:0001072. Uberongraph: posterior vena cava ; ASCT+b table: inferior vena cava
WARNING - Different labels found for UBERON:0001414. Uberongraph: median basilic vein ; ASCT+b table: median cubital vein
WARNING - Different labels found for UBERON:0004689. Uberongraph: naso-frontal vein ; ASCT+b table: nasofrontal vein
WARNING - Different labels found for UBERON:0006632. Uberongraph: musculo-phrenic artery ; ASCT+b table: musculophrenic artery
WARNING - Different labels found for UBERON:0005168. Uberongraph: renal interlobular vein ; ASCT+b table: interlobular renal vein
WARNING - Different labels found for UBERON:0002455. Uberongraph: common plantar digital arteries ; ASCT+b table: common plantar digital artery
WARNING - Different labels found for UBERON:0002080. Uberongraph: heart right ventricle ; ASCT+b table: right ventricle
WARNING - Different labels found for UBERON:0034727. Uberongraph: vestibular bulb artery ; ASCT+b table: artery of bulb of vestibule
WARNING - Different labels found for UBERON:0009885. Uberongraph: interlobar artery ; ASCT+b table: interlobar renal artery
WARNING - Different labels found for UBERON:0014685. Uberongraph: pterygoid plexus ; ASCT+b table: pterygoid venous plexus
WARNING - Different labels found for UBERON:0035042. Uberongraph: middle temporal artery ; ASCT+b table: middle temporal artery #2
WARNING - Different labels found for UBERON:0001508. Uberongraph: arch of aorta ; ASCT+b table: aortic arch
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