notes.md

##Development notes

Installing into a conda environment:

conda create -n juicebox_notebook python=3.9.1
conda activate juicebox_notebook
conda install pip
conda install jupyter
pip install -e .

Deploying to pypi

• Bump version number
• Add version tag
• Build the archive

rm -rf dist
python setup.py sdist bdist_wheel

• Upload to test.pypi

python -m twine upload --repository-url https://test.pypi.org/legacy/ dist/*

• Upload to pypi

python -m twine upload dist/*

Installing from test.pypi

pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple juicebox_notebook

Example Notebook

Colab example