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Watershed Labeling deprecated #66

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tischi opened this issue Jun 18, 2018 · 5 comments
Open

Watershed Labeling deprecated #66

tischi opened this issue Jun 18, 2018 · 5 comments

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@tischi
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tischi commented Jun 18, 2018

I was gonna use the Watershed algorithm, but found that one of its inputs, namely Labeling is deprecated. I was wondering what I am supposed to do? Shall I try to use it like it is or wait for a newer version?

@hanslovsky
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Related to #48 and #61

@hanslovsky
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FWIW I have an undocumented seeded watershed implementation in saalfeldlab/label-utilities that is also available on the imagej maven repo.

@imagejan
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@hanslovsky any plans to migrate this into imglib2-algorithm? I think it would be useful to have it there.

@hanslovsky
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Not in the near future, no:

  1. No tests
  2. written in kotlin and would need to be ported to plain Java
  3. would need to add documentation that satisfies imglib2 standards
  4. It is available through the imagej maven repo, so anybody can use it.

@ctrueden
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@imagejan @hanslovsky Maybe we can just wrap it as an op in imagej-ops.

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