0.10.0

Added

• Support for using opened streams.

Changed

• Consider image as full tiled if only one tile.

Removed

• CidConceptCode.from_meaning(), use constructor with only meaning instead.

Fixed

• Correct formatting of decimal string values when writing dataset.

0.9.0

Added

• Support for opening DICOM WSI using DICOMWeb.
• save() now takes the optional parameter add_missing_levels, that enables adding missing pyramid levels up to the single-tile level.
• read_region(), read_region_mm(), and read_region_mpp() takes an optional parameter threads, that allows multiple threads to be used for stitching togheter the region.

Changed

• WsiDicom is now initalized using a Source, that is responsible for provides the instances to view.
• Saving a WsiDicom is now handled by WsiDicomFileTarget.
• Refactoring due to adding support for DICOMWeb and opening instances using Source and saving using Target.
• Frame positions and tiling for levels are now parsed lazily, e.g. on first tile access.

Removed

• The construct_pyramid() method of the Levels-class has been removed in favour of the add_missing_levels-parameter in save()

0.8.0

Added

• Set TotalPixelMatrixOriginSequence and ImageOrientationSlide from ImageOrgin object.

0.7.0

Added

• Parameter to change label to given image.

Changed

• Label and overview series can now be None.

0.6.0

Changed

• Raise WsiDicomNotFoundError if no files found for open().
• Added Python 3.11 as supported version.

0.5.0

Added

• Method to center-zoom a Region or RegionMm.

Changed

• Do not use threads in method WsiDicomFileWriter._write_pixel_data() if only one worker.

0.4.0

Added

• Focal planes are considered equal if configurable withing threshold distance, see config.focal_plane_distance_threshold
• Option to read region defined in slide coordinate system for get_region_mm().

Changed

• Default chunk size for saving is now set to 16 tiles.
• Drop support for python 3.7.

Fixed

• Focal planes are now written to file in correct order.

0.3.2

Fixed

• Fix version in init.py

0.3.1

Fixed

• Order of paramaters for ConceptCode matches pydicom Code.

0.3.0

Added

• Simple check for if DICOM WSI is formatted for fast viewing (WsiDicom.ready_for_viewing()).
• version added.

Changed

• Action for downloading test data.
• Do not set pydicom configuration parameters.

Fixed

• Use correct data type for 32 bit integer in numpy arrays.
• Fix check for if focal planes are sparse.