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python-versions = "^3.9" -content-hash = "787f55fdb4704bb080325fdf5b327d363603cacd65e37c59db65911415383935" +content-hash = "c6d35a7de5125b2a55af28100536471bdccef76874d0c955f2fa5e972f61f9cd" diff --git a/pyproject.toml b/pyproject.toml index 6eb0001..99de4fe 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "wsidicomizer" -version = "0.14.1" +version = "0.14.2" description = "Tool for reading WSI files from proprietary formats and optionally convert them to to DICOM" authors = ["Erik O Gabrielsson "] license = "Apache-2.0" @@ -18,8 +18,7 @@ classifiers = [ [tool.poetry.dependencies] python = "^3.9" -wsidicom = "^0.20.3" -opentile = "^0.12.0" +wsidicom = "^0.20.4" numpy = "^1.22.0" pydicom = ">=2.1.0" czifile = ">=2019.7.2" @@ -27,6 +26,7 @@ tiffslide = "^2.4.0" openslide-python = { version = "^1.3.0", optional = true } scyjava = { version = "^1.8.1", optional = true } ome-types = {version = "^0.5.0", optional = true } +opentile = "^0.13.1" [tool.poetry.extras] openslide = ["openslide-python"] diff --git a/wsidicomizer/__init__.py b/wsidicomizer/__init__.py index b6eff57..9ec31ca 100644 --- a/wsidicomizer/__init__.py +++ b/wsidicomizer/__init__.py @@ -14,6 +14,6 @@ from wsidicomizer.wsidicomizer import WsiDicomizer -__version__ = "0.14.1" +__version__ = "0.14.2" __all__ = ["WsiDicomizer"] diff --git a/wsidicomizer/sources/opentile/opentile_image_data.py b/wsidicomizer/sources/opentile/opentile_image_data.py index 09fa0f4..eee2cc9 100644 --- a/wsidicomizer/sources/opentile/opentile_image_data.py +++ b/wsidicomizer/sources/opentile/opentile_image_data.py @@ -20,7 +20,7 @@ from PIL import Image as Pillow from PIL.Image import Image from pydicom.uid import JPEG2000, UID, JPEG2000Lossless, JPEGBaseline8Bit -from tifffile.tifffile import COMPRESSION, PHOTOMETRIC +from tifffile import COMPRESSION, PHOTOMETRIC from wsidicom.codec import Encoder from wsidicom.geometry import Point, Size, SizeMm from wsidicom.metadata import Image as ImageMetadata