Skip to content

Latest commit

 

History

History

behavioral_snapshots

How to read behavioral snapshot figures

Overview column (for each mouse in figures per lab, leftmost column in figures per mouse)

1st panel from top: weight and water intake

Black curve and datapoints: animal's weight over time. White diamond indicates the reference weight at the moment that a water restriction started (indicated in Alyx). Dashed lines show 85% and 75% of this reference weight, for each period in which the animal was water restricted. If the animal was taken off water restriction (e.g. got a bottle in its cage during holidays), a new water restriction with associated reference weigth and 85%/75% lines is shown.

Colored bars: cumulative water intake per day, colors indicate the type of water. 10% sucrose is the standard water type that's earned in the behavioral task, hydrogel is used for top-up during the week (if animals don't earn their required liquids in the task), and in weekends measured water or adlib water with 2% citric acid can be given.

2nd panel from top: session duration and trial count

For each day of the behavioral task (starting with trainingChoiceWorld), number of trials performed and duration of the session.

3rd panel from top: performance and RT

For each day of the behavioral task, performance (only on easy trials, i.e. 50% and 100% contrast) and median RT. We've observed that once the two 'cross over', i.e. median RT goes below accuracy, animals will become proficient at the task soon after.

4th panel from top: contrast/choice heatmap

For each day of the behavioral task (x-axis) and each contrast level (y-axis), the fraction of rightward choices. Ideal performance would be dark blue bars at the top half, and dark red bars at the bottom half. This plot is basically a flattened psychometric function into a heatmap, over days. You can see when additional, more difficult contrasts are introduced over training.