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2 changes: 1 addition & 1 deletion 010_api_reference.html
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<li class="toctree-l1"><a class="reference internal" href="public_docs/public_introduction.html">Publicly available IBL data</a></li>
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2 changes: 1 addition & 1 deletion 02_installation.html
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<li class="toctree-l1"><a class="reference internal" href="public_docs/public_introduction.html">Publicly available IBL data</a></li>
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2 changes: 1 addition & 1 deletion 06_examples.html
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<li class="toctree-l1"><a class="reference internal" href="public_docs/public_introduction.html">Publicly available IBL data</a></li>
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<li class="toctree-l1"><a class="reference internal" href="notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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2 changes: 1 addition & 1 deletion 09_contribution.html
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<li class="toctree-l1"><a class="reference internal" href="public_docs/public_introduction.html">Publicly available IBL data</a></li>
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<li class="toctree-l1"><a class="reference internal" href="notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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2 changes: 1 addition & 1 deletion _autosummary/brainbox.atlas.html
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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9 changes: 2 additions & 7 deletions _autosummary/brainbox.behavior.dlc.html
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<td><p>Estimates pupil diameter by taking median of different computations.</p></td>
</tr>
<tr class="row-odd"><td><p><a class="reference internal" href="#brainbox.behavior.dlc.get_smooth_pupil_diameter" title="brainbox.behavior.dlc.get_smooth_pupil_diameter"><code class="xref py py-obj docutils literal notranslate"><span class="pre">get_smooth_pupil_diameter</span></code></a></p></td>
<td><p><dl class="field-list simple">
<dt class="field-odd">param diameter_raw<span class="colon">:</span></dt>
<dd class="field-odd"><p>np.array, raw pupil diameters, calculated from (thresholded) dlc traces</p>
</dd>
</dl>
</p></td>
<td><p></p></td>
</tr>
<tr class="row-even"><td><p><a class="reference internal" href="#brainbox.behavior.dlc.get_sniffs" title="brainbox.behavior.dlc.get_sniffs"><code class="xref py py-obj docutils literal notranslate"><span class="pre">get_sniffs</span></code></a></p></td>
<td><p>Compute sniff times from the nose tip</p></td>
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2 changes: 1 addition & 1 deletion _autosummary/brainbox.behavior.html
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_brainwidemap.html">Data Release - Brain Wide Map</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_spikesorting_benchmarks.html">Data Release - Spike sorting benchmark datasets</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_brainwidemap.html">Data Release - Brain Wide Map</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_spikesorting_benchmarks.html">Data Release - Spike sorting benchmark datasets</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
<li class="toctree-l1"><a class="reference internal" href="../public_docs/data_release_pilot.html">Data Release - Pilot Dataset</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_spikesorting_benchmarks.html">Data Release - Spike sorting benchmark datasets</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_behavior.html">Data Release - Behavior</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../public_docs/public_introduction.html">Publicly available IBL data</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_repro_ephys.html">Data Release - Reproducible Ephys Paper</a></li>
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<li class="toctree-l1"><a class="reference internal" href="../notebooks_external/data_release_spikesorting_benchmarks.html">Data Release - Spike sorting benchmark datasets</a></li>
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