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int-brain-lab · Nov 2, 2023 · 166c4c5 · 166c4c5
1 parent 47b5eff
commit 166c4c5
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Showing 2 changed files with 3 additions and 4 deletions.
diff --git a/ibllib/io/extractors/ephys_fpga.py b/ibllib/io/extractors/ephys_fpga.py
@@ -113,13 +113,12 @@ def _sync_to_alf(raw_ephys_apfile, output_path=None, save=False, parts=''):
     else:
         raw_ephys_apfile = Path(raw_ephys_apfile)
         sr = spikeglx.Reader(raw_ephys_apfile)
-    opened = sr.is_open
-    if not opened:  # if not (opened := sr.is_open)  # py3.8
+    if not (opened := sr.is_open):
         sr.open()
     # if no output, need a temp folder to swap for big files
     if not output_path:
         output_path = raw_ephys_apfile.parent
-    file_ftcp = Path(output_path).joinpath(f'fronts_times_channel_polarity{str(uuid.uuid4())}.bin')
+    file_ftcp = Path(output_path).joinpath(f'fronts_times_channel_polarity{uuid.uuid4()}.bin')
 
     # loop over chunks of the raw ephys file
     wg = neurodsp.utils.WindowGenerator(sr.ns, int(SYNC_BATCH_SIZE_SECS * sr.fs), overlap=1)

diff --git a/requirements.txt b/requirements.txt
@@ -26,7 +26,7 @@ tqdm>=4.32.1
 ibl-neuropixel>=0.8.1
 iblutil>=1.7.0
 labcams  # widefield extractor
-ONE-api>=2.4
+ONE-api>=2.5
 slidingRP>=1.0.0  # steinmetz lab refractory period metrics
 wfield==0.3.7  # widefield extractor frozen for now (2023/07/15) until Joao fixes latest version
 psychofit