Updated trusted tools (2024-12-07)

jasonjgill · Dec 7, 2024 · f7bd1bc · f7bd1bc
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diff --git a/bgruening.yaml.lock b/bgruening.yaml.lock
@@ -157,6 +157,7 @@ tools:
   - 3ee0ef312022
   - 8d4f03b5fe9d
   - cb8dfd28c16f
+  - cd11366d92cf
   - cd256484eb1a
   - de24438c9988
   - e27815e82dd4

diff --git a/europe-custom.yaml.lock b/europe-custom.yaml.lock
@@ -1167,6 +1167,7 @@ tools:
   - 41929aa1e7f3
   - 44959aa06aeb
   - 4df95e2d7f61
+  - 53255f6eecfc
   - 5ec75f5dae3c
   - 79de45b5069b
   - 7ed2edc1337f

diff --git a/tools_iuc.yaml.lock b/tools_iuc.yaml.lock
@@ -919,6 +919,7 @@ tools:
 - name: fastk_fastk
   owner: iuc
   revisions:
+  - 8049cb5537b7
   - 87f4b4dced3e
   - 9f8c786bd424
   - ff827f983bbb
@@ -3261,6 +3262,7 @@ tools:
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+  - c3ffb2c1e314
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   - fb7068d30ec9
@@ -3271,6 +3273,7 @@ tools:
   revisions:
   - 126abc4b03f1
   - 1e52af48d34e
+  - 45828071edc3
   - 57aeaf6b237d
   - 7ec5229e2a19
   - 8c5cecbfc3aa
@@ -3285,6 +3288,7 @@ tools:
   owner: bgruening
   revisions:
   - 163fd744e235
+  - 1a31e75e979e
   - 23b8d6b8960c
   - cab616fe7e64
   tool_panel_section_label: HiCExplorer
@@ -3297,6 +3301,7 @@ tools:
   - 43c24d0bd463
   - 46793007f090
   - 61e2d34c5b99
+  - '920526260066'
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   - ae8bf5420df2
   - b9ab56aecd18
@@ -3315,6 +3320,7 @@ tools:
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   - b892fa1fcaec
   - db4a82804126
+  - f6a169b5e43b
   - fadd03fbc4f5
   - feb7f62a0ff9
   tool_panel_section_label: HiCExplorer
@@ -3332,11 +3338,13 @@ tools:
   - 6ef732512682
   - 7668fac6cc3a
   - f8320df1866b
+  - ff1af7bac1cb
   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_chicviewpoint
   owner: bgruening
   revisions:
   - 0dabfd9a496b
+  - 37125838e360
   - 40fee49bc6c3
   - 68c92dfd03d7
   - 6d76e532b669
@@ -3353,6 +3361,7 @@ tools:
   revisions:
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+  - 6f8debcf2ac9
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@@ -3376,12 +3385,14 @@ tools:
   - cc52e4ded146
   - cd29c9a2ad55
   - e06265d204f6
+  - e8760fc0e29b
   - ea297a9c6f11
   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_hicaggregatecontacts
   owner: bgruening
   revisions:
   - 1b25346775db
+  - 30677e95bc89
   - 4ba4b59dcff1
   - 63c8377c58b3
   - 7066a1eda176
@@ -3400,6 +3411,7 @@ tools:
   revisions:
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   - 2818b428a5c5
+  - 3240e8a7c54f
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@@ -3425,6 +3437,7 @@ tools:
   - 9edf8894a22d
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+  - d9967770de96
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   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_hiccomparematrices
@@ -3435,6 +3448,7 @@ tools:
   - 41aab2463ca4
   - 4f9305d3bb34
   - 55b4b8bc250d
+  - 5dd1aae12f03
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@@ -3452,6 +3466,7 @@ tools:
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+  - 87eb9c58cd19
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@@ -3467,6 +3482,7 @@ tools:
   - 2f62a87d4017
   - 3b15581e7ca7
   - 3e598b8e72e7
+  - 574f295b5ba4
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@@ -3482,6 +3498,7 @@ tools:
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+  - 937b7b9832d0
   - 9949f055db84
   - bc027a1c0952
   - c543c41377dd
@@ -3494,6 +3511,7 @@ tools:
 - name: hicexplorer_hiccorrelate
   owner: bgruening
   revisions:
+  - 0f5786ffa10d
   - 1099d84fcc21
   - 2786a931cad2
   - 2b4d6a8dab36
@@ -3516,6 +3534,7 @@ tools:
   - 1119cdd14ddb
   - 1cf50a7d0a05
   - 2d1f9759fa0e
+  - 4375e25de06a
   - 5759cd7db0d1
   - bf9379529c3e
   - c3f9037423bd
@@ -3527,6 +3546,7 @@ tools:
   owner: bgruening
   revisions:
   - 07dd436ea686
+  - 4977f65da0ff
   - 5dfba24d7bdd
   - 608538d083a2
   - 77d8e0fd162a
@@ -3545,6 +3565,7 @@ tools:
   - 972dcccb5bbc
   - aa829050d061
   - ad852622d00a
+  - f0b1bd38745a
   - f1b3902f8baf
   - fc0667d83f7c
   tool_panel_section_label: HiCExplorer
@@ -3554,6 +3575,7 @@ tools:
   - 116ddd1627cd
   - 11de0d28ab30
   - 1d9b575fe97d
+  - 478aacfbaa37
   - 5746d61f0a91
   - 6b7987d22eab
   - 755df866ad0c
@@ -3568,6 +3590,7 @@ tools:
 - name: hicexplorer_hichyperoptdetectloops
   owner: bgruening
   revisions:
+  - 3e5c86c2f80d
   - 409396ea5cf0
   - 7f7c6ead2d0d
   - 89fb1aab755b
@@ -3583,6 +3606,7 @@ tools:
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+  - 7fbd6feba1ca
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@@ -3594,6 +3618,7 @@ tools:
   revisions:
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   - 55b013e59018
+  - 908fa330b93b
   - c261b6b05ee3
   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_hicmergedomains
@@ -3604,11 +3629,13 @@ tools:
   - 6f725a516914
   - b376ef118807
   - b6b8c8672756
+  - febfddb0b3e8
   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_hicmergeloops
   owner: bgruening
   revisions:
   - 1511a8ebe906
+  - 1d9799f4b854
   - 25332cfeac05
   - 420868438a99
   - 49b82255b72f
@@ -3630,6 +3657,7 @@ tools:
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+  - 9d93c8fbe0a6
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@@ -3644,6 +3672,7 @@ tools:
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+  - 5e83c077e31d
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@@ -3668,12 +3697,14 @@ tools:
   - c7f55f65b449
   - d5a86de86846
   - ebb9b94138c1
+  - f86ca478c6af
   tool_panel_section_label: HiCExplorer
 - name: hicexplorer_hicplotaverageregions
   owner: bgruening
   revisions:
   - 0dff8b5011c0
   - 2371fad10021
+  - 3f1b286a5c34
   - 5ae69a0a33bf
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@@ -3693,6 +3724,7 @@ tools:
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   - 6326cd29c1c3
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+  - 89cfe7de541b
   - 8c1ac76d7063
   - a4a413dcc59d
   - ace4cbd036c4
@@ -3704,6 +3736,7 @@ tools:
 - name: hicexplorer_hicplotmatrix
   owner: bgruening
   revisions:
+  - 025a128652dc
   - 12d51d7be66f
   - 40b33e101621
   - 4d2f071002b1
@@ -3721,6 +3754,7 @@ tools:
 - name: hicexplorer_hicplotsvl
   owner: bgruening
   revisions:
+  - 1602cc5b673c
   - 1923cc7e6bc2
   - 279fb179dae7
   - 337705015ee8
@@ -3745,6 +3779,7 @@ tools:
   - 84d4b83f092a
   - 88208ca6cb90
   - 8d203e74869b
+  - a10fce08c2dc
   - b637a1e3cb14
   - d5c24ac2da6e
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@@ -3761,6 +3796,7 @@ tools:
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+  - b13e7a200525
   - b599d3000966
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@@ -3778,6 +3814,7 @@ tools:
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+  - d74cf4a61d65
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@@ -3805,6 +3842,7 @@ tools:
   - ae9cc6dbfaca
   - b3553a0a5dcf
   - dc25d1f9927b
+  - df64cc4dfb4d
   - e8dfe346a207
   - f36828ebdc54
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@@ -3822,6 +3860,7 @@ tools:
   - 662109a754b5
   - bccefbea9b8d
   - cef9fb4ece1c
+  - d890828ab02a
   - f011486cbaaa
   tool_panel_section_label: HiCExplorer
 - name: schicexplorer_schicadjustmatrix
@@ -4169,6 +4208,7 @@ tools:
   - 41929aa1e7f3
   - 44959aa06aeb
   - 4df95e2d7f61
+  - 53255f6eecfc
   - 5ec75f5dae3c
   - 79de45b5069b
   - 7ed2edc1337f
@@ -4190,6 +4230,7 @@ tools:
   - 13022c3d3076
   - 178bdbdb6d24
   - 1cd2511a396e
+  - 381a32c51141
   - 3a1253ee137b
   - 42ce70172b72
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@@ -4801,6 +4842,7 @@ tools:
   revisions:
   - 18517edb4733
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+  - 3a89c3f99f3d
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   - 5b5a7af9fbb4
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@@ -4905,6 +4947,7 @@ tools:
   revisions:
   - 04144473e59e
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+  - 1770d188f72d
   - 1937c2b4da7a
   - 1bc3657cd694
   - 5b752525bd6f
@@ -5681,11 +5724,13 @@ tools:
 - name: phyloseq_from_biom
   owner: iuc
   revisions:
+  - 1feea247d08a
   - c0101c72b8af
   tool_panel_section_label: Metagenomic Analysis
 - name: phyloseq_from_dada2
   owner: iuc
   revisions:
+  - 40ebae5bbe51
   - 46a99bd1f10e
   - 87064cb77a52
   - b85ba18a8f36
@@ -5695,11 +5740,13 @@ tools:
   revisions:
   - 11d43fa12aab
   - 92e77800ef2c
+  - c35e0075c7a2
   - dfe800a3faaf
   tool_panel_section_label: Metagenomic Analysis
 - name: phyloseq_plot_richness
   owner: iuc
   revisions:
+  - 1a6c2cc92c6e
   - 1ff178d1757e
   - 92b82deaaed1
   - fb7c4bbe8994
@@ -11837,6 +11884,7 @@ tools:
   revisions:
   - 3c19c84fbce2
   - 78df8fc2b3ab
+  - a40dd4fd3096
   - d9965e143053
   tool_panel_section_label: Variant Calling
 - name: vardict_java
@@ -12441,6 +12489,7 @@ tools:
 - name: data_manager_mapseq
   owner: iuc
   revisions:
+  - 19ef193d1316
   - 23511530b8fd
   - 4cd97cc67061
   - dbf2735e8480