From 5f333dae7a50da6e5a23efa631bda76c55f90f21 Mon Sep 17 00:00:00 2001
From: Nikola Sekulovski <nikolasekulovski7@gmail.com>
Date: Fri, 22 Nov 2024 17:26:48 +0100
Subject: [PATCH] Updating renv.lock

---
 renv.lock | 2109 ++++++++++++-----------------------------------------
 1 file changed, 455 insertions(+), 1654 deletions(-)

diff --git a/renv.lock b/renv.lock
index 6ac3d0b..eeba594 100644
--- a/renv.lock
+++ b/renv.lock
@@ -1,6 +1,7 @@
+
 {
   "R": {
-    "Version": "4.4.1",
+    "Version": "4.4.2",
     "Repositories": [
       {
         "Name": "CRAN",
@@ -13,655 +14,315 @@
       "Package": "BDgraph",
       "Version": "2.73",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
-        "ggplot2",
         "igraph",
-        "pROC"
-      ],
-      "Hash": "6b03ac69d6246adfec6f87fff9b0150c"
-    },
-    "BFpack": {
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-      "Version": "1.3.0",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "Bergm",
-        "MASS",
-        "QRM",
-        "R",
-        "bain",
-        "ergm",
-        "extraDistr",
-        "lme4",
-        "mvtnorm",
-        "pracma",
-        "sandwich",
-        "stats",
-        "utils"
-      ],
-      "Hash": "3f4574ae8b2e7e28f94dd13daec49c7e"
-    },
-    "BGGM": {
-      "Package": "BGGM",
-      "Version": "2.1.3",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "BFpack",
-        "GGally",
-        "MASS",
-        "R",
-        "Rcpp",
-        "RcppArmadillo",
-        "RcppDist",
-        "RcppProgress",
-        "Rdpack",
         "ggplot2",
-        "ggridges",
-        "grDevices",
-        "methods",
-        "mvnfast",
-        "network",
-        "reshape",
-        "sna",
-        "stats",
-        "utils"
-      ],
-      "Hash": "f4b6d4935c4b1db75016cc973b7503a5"
-    },
-    "BH": {
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-      "Source": "Repository",
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-      "Hash": "a8235afbcd6316e6e91433ea47661013"
-    },
-    "Bergm": {
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-      "Version": "5.0.7",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "MCMCpack",
-        "Matrix",
-        "R",
-        "Rglpk",
-        "coda",
-        "ergm",
-        "grDevices",
-        "graphics",
-        "matrixcalc",
-        "mvtnorm",
-        "network",
-        "statnet.common",
-        "stats",
-        "utils"
-      ],
-      "Hash": "4638662763c37b9960a59a0370a1417b"
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-      "Repository": "CRAN",
-      "Requirements": [
-        "stats"
-      ],
-      "Hash": "72f87e0092e39384aee16df8d67d7410"
+        "pROC"
+      ]
     },
     "Formula": {
       "Package": "Formula",
       "Version": "1.2-5",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
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         "stats"
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-      "Requirements": [
-        "R",
-        "RColorBrewer",
-        "dplyr",
-        "ggplot2",
-        "ggstats",
-        "grDevices",
-        "grid",
-        "gtable",
-        "lifecycle",
-        "magrittr",
-        "plyr",
-        "progress",
-        "rlang",
-        "scales",
-        "tidyr",
-        "utils"
-      ],
-      "Hash": "b11ac45c916608b7d1374ff87da053d5"
+      ]
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       "Package": "GPArotation",
       "Version": "2024.3-1",
       "Source": "Repository",
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       "Requirements": [
         "R",
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-      ],
-      "Hash": "b8b658ec0d7a6a55d9d01e00e3cafd20"
+      ]
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       "Version": "0.2.4",
       "Source": "Repository",
-      "Repository": "CRAN",
-      "Hash": "b5b77433b286dd869ff33ee7fd5c545f"
+      "Requirements": []
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       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
-        "Formula",
         "R",
-        "base64enc",
+        "methods",
+        "ggplot2",
         "cluster",
-        "colorspace",
-        "data.table",
+        "rpart",
+        "nnet",
         "foreign",
-        "ggplot2",
+        "gtable",
         "grid",
         "gridExtra",
-        "gtable",
+        "data.table",
         "htmlTable",
+        "viridis",
         "htmltools",
-        "knitr",
-        "methods",
-        "nnet",
+        "base64enc",
+        "colorspace",
         "rmarkdown",
-        "rpart",
-        "viridis"
-      ],
-      "Hash": "d638b141693a9c73f653787ea29db79f"
+        "knitr",
+        "Formula"
+      ]
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       "Package": "IsingFit",
       "Version": "0.4",
       "Source": "Repository",
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       "Requirements": [
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         "R",
-        "glmnet",
-        "qgraph"
-      ],
-      "Hash": "8e7b9db02d223012abe9c9218304a4b0"
+        "qgraph",
+        "Matrix",
+        "glmnet"
+      ]
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     "IsingSampler": {
       "Package": "IsingSampler",
       "Version": "0.2.3",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
-        "R",
         "Rcpp",
-        "dplyr",
+        "R",
+        "plyr",
         "magrittr",
         "nnet",
-        "plyr"
-      ],
-      "Hash": "06bdb4fbbb2cd2274c00829abc25afad"
+        "dplyr"
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-      "Source": "Repository",
-      "Repository": "CRAN",
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-        "grDevices",
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-        "methods",
-        "stats",
-        "utils"
-      ],
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-    },
-    "MCMCpack": {
-      "Package": "MCMCpack",
-      "Version": "1.7-1",
+      "Version": "7.3-61",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
-        "MASS",
         "R",
-        "coda",
         "grDevices",
         "graphics",
-        "lattice",
-        "mcmc",
-        "methods",
-        "quantreg",
         "stats",
-        "utils"
-      ],
-      "Hash": "8e69ecc7ebf5e5113e89e1bf607c26bc"
+        "utils",
+        "methods"
+      ]
     },
     "Matrix": {
       "Package": "Matrix",
-      "Version": "1.7-0",
+      "Version": "1.7-1",
       "Source": "Repository",
-      "Repository": "RSPM",
       "Requirements": [
         "R",
+        "methods",
         "grDevices",
         "graphics",
         "grid",
         "lattice",
-        "methods",
         "stats",
         "utils"
-      ],
-      "Hash": "1920b2f11133b12350024297d8a4ff4a"
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-      "Version": "0.5-3",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "Matrix",
-        "R",
-        "methods",
-        "stats"
-      ],
-      "Hash": "0776bf7526869e0286b0463cb72fb211"
+      ]
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     "NetworkToolbox": {
       "Package": "NetworkToolbox",
       "Version": "1.4.2",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
-        "IsingFit",
-        "MASS",
         "R",
-        "R.matlab",
+        "psych",
         "corrplot",
-        "doParallel",
         "fdrtool",
-        "foreach",
+        "R.matlab",
         "igraph",
-        "parallel",
-        "pbapply",
+        "qgraph",
         "ppcor",
-        "psych",
+        "parallel",
+        "foreach",
+        "doParallel",
+        "MASS",
         "pwr",
-        "qgraph"
-      ],
-      "Hash": "1763e5fd4d6bb80213954c85d15d47a7"
-    },
-    "QRM": {
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-      "Version": "0.4-31",
-      "Source": "Repository",
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-      "Requirements": [
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-        "R",
-        "Rcpp",
-        "gsl",
-        "methods",
-        "mgcv",
-        "mvtnorm",
-        "numDeriv",
-        "timeDate",
-        "timeSeries"
-      ],
-      "Hash": "a15451f7ead10868d295cfac8737aa0e"
+        "IsingFit",
+        "pbapply"
+      ]
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       "Package": "R.matlab",
       "Version": "3.7.0",
       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
         "R",
+        "methods",
+        "utils",
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         "R.oo",
-        "R.utils",
-        "methods",
-        "utils"
-      ],
-      "Hash": "e64c6e63521ce9407e8deacecab95b11"
+        "R.utils"
+      ]
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       "Package": "R.methodsS3",
       "Version": "1.8.2",
       "Source": "Repository",
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-      "Hash": "278c286fd6e9e75d0c2e8f731ea445c8"
+      ]
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     "R.oo": {
       "Package": "R.oo",
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         "methods",
         "utils"
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+      ]
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       "Package": "R.utils",
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       "Source": "Repository",
-      "Repository": "CRAN",
       "Requirements": [
         "R",
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         "R.oo",
         "methods",
+        "utils",
         "tools",
-        "utils"
-      ],
-      "Hash": "3dc2829b790254bfba21e60965787651"
+        "R.methodsS3"
+      ]
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     "R6": {
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       "Source": "Repository",
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       "Requirements": [
         "R"
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-      "Hash": "470851b6d5d0ac559e9d01bb352b4021"
+      ]
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     "RColorBrewer": {
       "Package": "RColorBrewer",
       "Version": "1.1-3",
       "Source": "Repository",
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       "Requirements": [
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-      "Hash": "45f0398006e83a5b10b72a90663d8d8c"
+      ]
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     "Rcpp": {
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       "Source": "Repository",
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       "Requirements": [
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-      "Hash": "6b868847b365672d6c1677b1608da9ed"
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-        "tibble"
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         "R",
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+        "utils",
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-      "Hash": "e84984bf5f12a18628d9a02322128dfd"
+        "stats"
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     "boot": {
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-      "Version": "1.3-30",
+      "Version": "1.3-31",
       "Source": "Repository",
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       "Requirements": [
         "R",
         "graphics",
         "stats"
-      ],
-      "Hash": "96abeed416a286d4a0f52e550b612343"
+      ]
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       "Source": "Repository",
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       "Requirements": [
-        "IsingFit",
-        "IsingSampler",
-        "Matrix",
-        "NetworkToolbox",
+        "ggplot2",
         "R",
-        "abind",
-        "corpcor",
+        "methods",
+        "igraph",
+        "IsingFit",
+        "qgraph",
         "dplyr",
-        "ggplot2",
+        "tidyr",
         "gtools",
-        "igraph",
-        "methods",
-        "mgm",
+        "corpcor",
+        "IsingSampler",
         "mvtnorm",
-        "networktools",
+        "abind",
+        "Matrix",
+        "snow",
+        "mgm",
+        "NetworkToolbox",
         "pbapply",
-        "qgraph",
+        "networktools",
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-        "snow",
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@@ -674,14 +335,12 @@
         "stringr",
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-      ],
-      "Hash": "8fcc818f3b9887aebaf206f141437cc9"
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@@ -696,261 +355,187 @@
         "mime",
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-      ],
-      "Hash": "b299c6741ca9746fb227debcb0f9fb6c"
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-        "rlang"
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-      "Hash": "cd9a672193789068eb5a2aad65a0dedf"
+        "rlang",
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       "Source": "Repository",
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         "processx",
+        "R6",
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-        "MASS",
         "R",
         "stats",
-        "utils"
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-      "Hash": "f91f6b29f38b8c280f2b9477787d4bb2"
+        "utils",
+        "MASS"
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@@ -2219,217 +1449,146 @@
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@@ -3012,18 +1940,15 @@
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@@ -3034,15 +1959,14 @@
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@@ -3051,291 +1975,168 @@
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