From 862cb1026ecb175d6fc520af8d05f5faabde6fb1 Mon Sep 17 00:00:00 2001
From: JTPetter <61797391+JTPetter@users.noreply.github.com>
Date: Thu, 26 Sep 2024 15:18:54 +0200
Subject: [PATCH 1/2] Values for LSL, USL, target labels and unit tests updates

---
 R/processCapabilityStudies.R                         |  9 +++++----
 .../capability-of-the-process1-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process12-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process12-subplot-2.svg        | 12 ++++++------
 .../capability-of-the-process12-subplot-3.svg        | 12 ++++++------
 .../capability-of-the-process13-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process13-subplot-2.svg        | 12 ++++++------
 .../capability-of-the-process14-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process16-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process17-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process18-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process19-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process2-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process2-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process20-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-process20-subplot-2.svg        | 12 ++++++------
 .../capability-of-the-process20-subplot-3.svg        | 12 ++++++------
 .../capability-of-the-process3-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process4-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process4-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process5-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process5-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process6-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process6-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process7-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process7-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process8-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process8-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-process9-subplot-1.svg         | 12 ++++++------
 .../capability-of-the-process9-subplot-2.svg         | 12 ++++++------
 .../capability-of-the-processw1-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw10-subplot-1.svg       | 12 ++++++------
 .../capability-of-the-processw10-subplot-2.svg       | 12 ++++++------
 .../capability-of-the-processw10-subplot-3.svg       | 12 ++++++------
 .../capability-of-the-processw12-subplot-1.svg       | 12 ++++++------
 .../capability-of-the-processw14-subplot-1.svg       | 12 ++++++------
 .../capability-of-the-processw15-subplot-1.svg       | 12 ++++++------
 .../capability-of-the-processw2-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw2-subplot-2.svg        | 12 ++++++------
 .../capability-of-the-processw3-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw4-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw5-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw6-subplot-1.svg        | 12 ++++++------
 .../capability-of-the-processw7-subplot-1.svg        | 12 ++++++------
 .../process-capability-report21-subplot-7.svg        | 12 ++++++------
 .../process-capability-report22-subplot-4.svg        | 12 ++++++------
 .../process-capability-report22-subplot-9.svg        | 12 ++++++------
 .../process-capability-report23-subplot-4.svg        | 12 ++++++------
 .../process-capability-report23-subplot-9.svg        | 12 ++++++------
 .../process-capability-report24-subplot-5.svg        | 12 ++++++------
 .../process-capability-reportw16-subplot-7.svg       | 12 ++++++------
 .../process-capability-reportw17-subplot-4.svg       | 12 ++++++------
 .../process-capability-reportw17-subplot-9.svg       | 12 ++++++------
 .../process-capability-reportw18-subplot-4.svg       | 12 ++++++------
 .../process-capability-reportw18-subplot-9.svg       | 12 ++++++------
 .../process-capability-reportw19-subplot-5.svg       | 12 ++++++------
 56 files changed, 335 insertions(+), 334 deletions(-)

diff --git a/R/processCapabilityStudies.R b/R/processCapabilityStudies.R
index ba7c3e22..5f47111a 100644
--- a/R/processCapabilityStudies.R
+++ b/R/processCapabilityStudies.R
@@ -743,18 +743,19 @@ processCapabilityStudies <- function(jaspResults, dataset, options) {
       colnames(specLimitsDf) <- c("label", "xIntercept", "lty", "yPosLabel", "color")
       yPosLabel <- max(ggplot2::layer_scales(p)$y$range$range)
       if (options[["target"]]) {
-        specLimitsDf <- rbind(specLimitsDf, data.frame(label = gettext("Target"), xIntercept = options[["targetValue"]],
-                                                       lty = "solid", yPosLabel = yPosLabel, color = "darkgreen"))
+        specLimitsDf <- rbind(specLimitsDf, data.frame(label = gettextf("Target = %g", round(options[["targetValue"]], .numDecimals)),
+                                                       xIntercept = options[["targetValue"]], lty = "solid", yPosLabel = yPosLabel,
+                                                       color = "darkgreen"))
       }
       if (options[["lowerSpecificationLimit"]]) {
         lslLty <- if (options[["lowerSpecificationLimitBoundary"]]) "solid" else "dotted"
-        lslLabel <- if (options[["lowerSpecificationLimitBoundary"]]) "LB" else "LSL"
+        lslLabel <- if (options[["lowerSpecificationLimitBoundary"]]) gettextf("LB = %g", round(options[["lowerSpecificationLimitValue"]], .numDecimals)) else gettextf("LSL = %g", round(options[["lowerSpecificationLimitValue"]], .numDecimals))
         specLimitsDf <- rbind(specLimitsDf, data.frame(label = lslLabel, xIntercept = options[["lowerSpecificationLimitValue"]],
                                                        lty = lslLty, yPosLabel = yPosLabel, color = "darkred"))
       }
       if (options[["upperSpecificationLimit"]]) {
         uslLty <- if (options[["upperSpecificationLimitBoundary"]]) "solid" else "dotted"
-        uslLabel <- if (options[["upperSpecificationLimitBoundary"]]) "UB" else "USL"
+        uslLabel <- if (options[["upperSpecificationLimitBoundary"]]) gettextf("UB = %g", round(options[["upperSpecificationLimitValue"]], .numDecimals)) else gettextf("USL = %g", round(options[["upperSpecificationLimitValue"]], .numDecimals))
         specLimitsDf <- rbind(specLimitsDf, data.frame(label = uslLabel, xIntercept = options[["upperSpecificationLimitValue"]],
                                                        lty = uslLty, yPosLabel = yPosLabel, color = "darkred"))
       }
diff --git a/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process1-subplot-1.svg b/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process1-subplot-1.svg
index d232b2dc..5cfd3a50 100644
--- a/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process1-subplot-1.svg
+++ b/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process1-subplot-1.svg
@@ -48,12 +48,12 @@
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diff --git a/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process12-subplot-1.svg b/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process12-subplot-1.svg
index 6730c68b..52991c9e 100644
--- a/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process12-subplot-1.svg
+++ b/tests/testthat/_snaps/processCapabilityStudies/capability-of-the-process12-subplot-1.svg
@@ -46,12 +46,12 @@
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+<text x='55.28' y='47.88' text-anchor='middle' style='font-size: 12.80px; font-family: sans;' textLength='44.50px' lengthAdjust='spacingAndGlyphs'>LSL = 0</text>
+<polygon points='373.44,51.72 430.26,51.72 430.17,51.72 430.54,51.71 430.90,51.63 431.25,51.50 431.57,51.32 431.86,51.08 432.11,50.80 432.30,50.49 432.45,50.15 432.54,49.79 432.57,49.42 432.57,49.42 432.57,37.53 432.57,37.53 432.54,37.17 432.45,36.80 432.30,36.46 432.11,36.15 431.86,35.87 431.57,35.64 431.25,35.45 430.90,35.32 430.54,35.25 430.26,35.23 373.44,35.23 373.72,35.25 373.34,35.23 372.98,35.28 372.62,35.38 372.28,35.54 371.98,35.75 371.71,36.01 371.49,36.30 371.32,36.63 371.20,36.98 371.14,37.35 371.13,37.53 371.13,49.42 371.14,49.23 371.14,49.60 371.20,49.97 371.32,50.32 371.49,50.65 371.71,50.95 371.98,51.20 372.28,51.42 372.62,51.57 372.98,51.68 373.34,51.72 ' style='stroke-width: 0.53; fill: #FFFFFF;' />
+<text x='401.85' y='47.88' text-anchor='middle' style='font-size: 12.80px; font-family: sans;' textLength='53.75px' lengthAdjust='spacingAndGlyphs'>USL = 12</text>
 <line x1='54.96' y1='521.63' x2='517.69' y2='521.63' style='stroke-width: 0.64; stroke-linecap: butt;' />
 <line x1='32.17' y1='499.18' x2='32.17' y2='102.56' style='stroke-width: 0.64; stroke-linecap: butt;' />
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From 072ca777b5371977eb56cae9d0b2e4351165a630 Mon Sep 17 00:00:00 2001
From: JTPetter <61797391+JTPetter@users.noreply.github.com>
Date: Wed, 16 Oct 2024 14:37:27 +0200
Subject: [PATCH 2/2] fix unit tests

---
 .../{ => datasets/attributeCharts}/SPC_NP.csv |  0
 .../{ => datasets/attributeCharts}/SPC_P.csv  |  2 +-
 tests/testthat/test-attributesCharts.R        | 14 ++---
 tests/testthat/test-doeFactorial.R            | 51 +++++++------------
 .../test-doeResponseSurfaceMethodology.R      | 30 ++++-------
 5 files changed, 35 insertions(+), 62 deletions(-)
 rename tests/testthat/{ => datasets/attributeCharts}/SPC_NP.csv (100%)
 rename tests/testthat/{ => datasets/attributeCharts}/SPC_P.csv (92%)

diff --git a/tests/testthat/SPC_NP.csv b/tests/testthat/datasets/attributeCharts/SPC_NP.csv
similarity index 100%
rename from tests/testthat/SPC_NP.csv
rename to tests/testthat/datasets/attributeCharts/SPC_NP.csv
diff --git a/tests/testthat/SPC_P.csv b/tests/testthat/datasets/attributeCharts/SPC_P.csv
similarity index 92%
rename from tests/testthat/SPC_P.csv
rename to tests/testthat/datasets/attributeCharts/SPC_P.csv
index 781cdc0b..2fdd999f 100644
--- a/tests/testthat/SPC_P.csv
+++ b/tests/testthat/datasets/attributeCharts/SPC_P.csv
@@ -1,4 +1,4 @@
-"","ï..Month","Size","D","Proportion"
+"","Month","Size","D","Proportion"
 "1","Sep",150,21,0.14
 "2","Oct",153,16,0.105
 "3","Nov",170,30,0.176
diff --git a/tests/testthat/test-attributesCharts.R b/tests/testthat/test-attributesCharts.R
index dbdb499b..bd10a0e3 100644
--- a/tests/testthat/test-attributesCharts.R
+++ b/tests/testthat/test-attributesCharts.R
@@ -8,7 +8,7 @@ options$total <- "Size"
 options$attributesChart <- "defectives"
 options$attributesChartDefectivesChartType <- "npChart"
 set.seed(1)
-results <- runAnalysis("attributesCharts", "SPC_NP.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_NP.csv", options)
 
 test_that("np Chart plot matches", {
   plotName <- results[["results"]][["NPchartPlot"]][["data"]]
@@ -25,7 +25,7 @@ test_that("Test results for np chart table results match", {
 
 # P
 options$attributesChartDefectivesChartType <- "pChart"
-results <- runAnalysis("attributesCharts", "SPC_P.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_P.csv", options)
 
 test_that("p Chart plot matches", {
   plotName <- results[["results"]][["PchartPlot"]][["data"]]
@@ -35,7 +35,7 @@ test_that("p Chart plot matches", {
 
 # Laney's P
 options$attributesChartDefectivesChartType <- "laneyPPrimeChart"
-results <- runAnalysis("attributesCharts", "SPC_P.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_P.csv", options)
 
 test_that("Laney p' Chart plot matches", {
   plotName <- results[["results"]][["LaneyPPlot"]][["data"]]
@@ -48,7 +48,7 @@ test_that("Laney p' Chart plot matches", {
 options$attributesChartDefectivesChartType <- "npChart"
 options$attributesChart <- "defects"
 options$attributesChartDefectsChartType <- "cChart"
-results <- runAnalysis("attributesCharts", "SPC_NP.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_NP.csv", options)
 
 test_that("c Chart plot matches", {
   plotName <- results[["results"]][["CchartPlot"]][["data"]]
@@ -64,7 +64,7 @@ test_that("Test results for c chart table results match", {
 
 # U
 options$attributesChartDefectsChartType <- "uChart"
-results <- runAnalysis("attributesCharts", "SPC_P.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_P.csv", options)
 
 test_that("u Chart plot matches", {
   plotName <- results[["results"]][["UchartPlot"]][["data"]]
@@ -74,7 +74,7 @@ test_that("u Chart plot matches", {
 
 # Laneys U
 options$attributesChartDefectsChartType <- "laneyUPrimeChart"
-results <- runAnalysis("attributesCharts", "SPC_P.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_P.csv", options)
 
 test_that("Laney u' Chart plot matches", {
   plotName <- results[["results"]][["LaneyUPlot"]][["data"]]
@@ -84,7 +84,7 @@ test_that("Laney u' Chart plot matches", {
 
 ## I MR
 options$attributesChart <- "xmr"
-results <- runAnalysis("attributesCharts", "SPC_P.csv", options)
+results <- runAnalysis("attributesCharts", "datasets/attributeCharts/SPC_P.csv", options)
 
 test_that("Individuals and Moving Range Chart plot matches", {
   plotName <- results[["results"]][["IPlotA"]][["data"]]
diff --git a/tests/testthat/test-doeFactorial.R b/tests/testthat/test-doeFactorial.R
index 7a470032..37a592c4 100644
--- a/tests/testthat/test-doeFactorial.R
+++ b/tests/testthat/test-doeFactorial.R
@@ -23,8 +23,7 @@ options$selectedDesign2 <- list(list(levels = "Row 0", name = "data 1", values =
 options$selectedRow <- 0 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 
 test_that("1.1 Two Factor Two Level Factorial Design table results match", {
@@ -59,8 +58,7 @@ options$selectedDesign2 <- list(list(levels = c("Row 0", "Row 1", "Row 2"), name
 options$selectedRow <- 2 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("2.1 Five Factor Two Level Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -106,8 +104,7 @@ options$selectedDesign2 <- list(list(levels = c("Row 0", "Row 1", "Row 2"), name
 options$selectedRow <- 0 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("3.1 Five Factor Two Level Frac. Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -158,8 +155,7 @@ options$selectedDesign2 <- list(list(levels = c("Row 0", "Row 1", "Row 2", "Row
 options$selectedRow <- 3 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("4.1 Nine Factor Two Level Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -288,8 +284,7 @@ options$selectedDesign2 <- list(list(levels = c("Row 0", "Row 1", "Row 2", "Row
 options$selectedRow <- 0 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 
 test_that("5.1 Nine Factor Two Level Frac. Factorial Design table results match", {
@@ -337,8 +332,7 @@ options$selectedRow <- 1 # select design
 options$centerpoints <- 1
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("6.1 One Center Point Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -374,8 +368,7 @@ options$selectedRow <- 1 # select design
 options$centerpoints <- 2
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 
 test_that("7.1 Two Center Point Factorial Design table results match", {
@@ -412,8 +405,7 @@ options$selectedRow <- 1 # select design
 options$centerpoints <- 4
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 
 test_that("8.1 Four Center Point Factorial Design table results match", {
@@ -453,8 +445,7 @@ options$selectedRow <- 1 # select design
 options$blocks <- "2"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("9.1 Two Blocks Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -490,8 +481,7 @@ options$selectedRow <- 1 # select design
 options$blocks <- "4"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("10.1 Four Blocks Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -527,8 +517,7 @@ options$selectedRow <- 1 # select design
 options$blocks <- "8"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("11.1 Eight Blocks Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -570,8 +559,7 @@ options$selectedDesign2 <- list(list(levels = "Row 0", name = "data 1", values =
 options$selectedRow <- 0 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("12.1 Two Factor One HTC Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -605,8 +593,7 @@ options$selectedDesign2 <- list(list(levels = "Row 0", name = "data 1", values =
 options$selectedRow <- 1 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("13.1 Five Factor Two HTC Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -653,8 +640,7 @@ options$selectedDesign2 <- list(list(levels = "Row 0", name = "data 1", values =
 options$selectedRow <- 1 # select design
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("14.1 Seven Factor Three HTC Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -756,8 +742,7 @@ options$factorialType <- "generalFullFactorial"
 options$runOrder <- "runOrderStandard"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("15.1 Three Factor Three Level General Full Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -797,8 +782,7 @@ options$factorialType <- "generalFullFactorial"
 options$runOrder <- "runOrderStandard"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("16.1 Three Factor Four Level General Full Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
@@ -842,8 +826,7 @@ options$factorialType <- "generalFullFactorial"
 options$runOrder <- "runOrderStandard"
 options$setSeed <- TRUE
 set.seed(1)
-dataset <- NULL
-results <- runAnalysis("doeFactorial", dataset, options)
+results <- runAnalysis("doeFactorial", "debug.csv", options)
 
 test_that("17.1 Four Factor Six Level General Full Factorial Design table results match", {
   table <- results[["results"]][["displayDesign"]][["data"]]
diff --git a/tests/testthat/test-doeResponseSurfaceMethodology.R b/tests/testthat/test-doeResponseSurfaceMethodology.R
index f664fb70..f462c073 100644
--- a/tests/testthat/test-doeResponseSurfaceMethodology.R
+++ b/tests/testthat/test-doeResponseSurfaceMethodology.R
@@ -30,8 +30,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
   list(levels = c("Row 0", "Row 1"), name = "data 5", values = c(1.682, 1.633)) # alpha
 )
 options$selectedRow <- 1 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 test_that("1.1 Three Cont. Pred. Central Composite Design table results match", {
   table <- results[["results"]][["designTable"]][["data"]]
@@ -79,8 +78,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
   list(levels = c("Row 0", "Row 1"), name = "data 5", values = c(2.378, 2.366)) # alpha
 )
 options$selectedRow <- 1 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 test_that("2.1 Five Cont. Pred. Central Composite Design table results match", {
   table <- results[["results"]][["designTable"]][["data"]]
@@ -150,8 +148,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
   list(levels = c("Row 0", "Row 1"), name = "data 5", values = c(1.682, 1.633)) # alpha
 )
 options$selectedRow <- 1 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 
 test_that("3.1 Three Cont. Pred. Two. Disc. Pred. Central Composite Design table results match", {
@@ -239,8 +236,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
   list(levels = c("Row 0", "Row 1"), name = "data 5", values = c(2, 2)) # alpha
 )
 options$selectedRow <- 1 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 
 test_that("4.1 Four Cont. Pred. One. Disc. Pred. Central Composite Design table results match", {
@@ -310,8 +306,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
 )
 options$selectedRow <- 1 # select design
 options$alphaType <- "faceCentered"
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 test_that("5.1 Three Cont. Pred. Face Centered Central Composite Design table results match", {
   table <- results[["results"]][["designTable"]][["data"]]
@@ -358,8 +353,7 @@ options$selectedDesign2 <- list( # give design list, always five lists, number o
 )
 options$selectedRow <- 1 # select design
 options$alphaType <- "faceCentered"
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 
 
@@ -414,8 +408,7 @@ options$selectedDesign2 <- list( # give design list, always three lists, number
   list(levels = c("Row 0"), name = "data 3", values = c(3)) # centre points
 )
 options$selectedRow <- 0 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 test_that("7.1 Three Cont. Pred. Box-Behnken Design table results match", {
   table <- results[["results"]][["designTable"]][["data"]]
@@ -461,8 +454,7 @@ options$selectedDesign2 <- list( # give design list, always three lists, number
   list(levels = c("Row 0"), name = "data 3", values = c(3)) # centre points
 )
 options$selectedRow <- 0 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 
 test_that("8.1 Four Cont. Pred. Box-Behnken Design table results match", {
@@ -516,8 +508,7 @@ options$selectedDesign2 <- list( # give design list, always three lists, number
   list(levels = c("Row 0"), name = "data 3", values = c(3)) # centre points
 )
 options$selectedRow <- 0 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 test_that("9.1 Five Cont. Pred. Box-Behnken Design table results match", {
   table <- results[["results"]][["designTable"]][["data"]]
@@ -582,8 +573,7 @@ options$selectedDesign2 <- list( # give design list, always three lists, number
   list(levels = c("Row 0"), name = "data 3", values = c(6)) # centre points
 )
 options$selectedRow <- 0 # select design
-dataset <- NULL
-results <- runAnalysis("doeResponseSurfaceMethodology", dataset, options)
+results <- runAnalysis("doeResponseSurfaceMethodology", "debug.csv", options)
 
 
 test_that("10.1 Six Cont. Pred. One Disc. Pred. Box-Behnken Design table results match", {