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update TODO list
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jdfekete committed Apr 23, 2015
1 parent aadd03c commit 9be1c95
Showing 1 changed file with 4 additions and 2 deletions.
6 changes: 4 additions & 2 deletions TODO
Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,8 @@ Interaction:
MatLink

Reordering:
Dijkstra distance matrix
Improve the barycenter heuristic with swaps
Koren multiscale ACE: http://dx.doi.org/10.1109/INFVIS.2002.1173159
Tables/bipartite networks
Biclustering
Contingency tables methods:
PCA ordering
Expand All @@ -15,6 +14,8 @@ Reordering:
Elliptical

Reordering done:
Tables/bipartite networks
Distance matrix for graphs
Barycenter method:
http://www.informatica.si/PDF/29-3/13_Makinen-The%20Barycenter%20Heuristic....pdf
Optimal Leaf Ordering
Expand All @@ -23,3 +24,4 @@ Reordering done:
Bioinformatics, 19(9), pp 1070-8, 2003
http://www.cs.cmu.edu/~zivbj/compBio/k-aryBio.pdf
Inverse Cuthill-McKee

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