diff --git a/README.md b/README.md
index 76c001fdf..ae549fc6b 100644
--- a/README.md
+++ b/README.md
@@ -6,14 +6,14 @@ This is an empty IG
### Publication
This ImplementationGuide is published in the following locations:
-Continuous Build: __http://build.fhir.org/ig/openhie/fhir-ig-empty/branches/main/index.html__
-Canonical / permanent URL:
+Continuous Build: __http://build.fhir.org/ig/jembi/Zambia-Immunizations/branches/main/index.html__
+Canonical / permanent URL: __https://jembi.github.io/Zambia-Immunizations/index.html__
### Issues
Issues and change requests are managed here:
-Issues: __https://github.com/openhie/fhir-ig-empty/issues__
-Kanban board: __https://github.com/openhie/fhir-ig-empty/projects/1__
+Issues: __https://github.com/jembi/Zambia-Immunizations/issues__
+Kanban board: __https://github.com/jembi/Zambia-Immunizations/projects/1__
---
diff --git a/_genonce.sh b/_genonce.sh
index 38efcb44e..4f981f055 100755
--- a/_genonce.sh
+++ b/_genonce.sh
@@ -14,6 +14,8 @@ fi
echo "$txoption"
+export JAVA_TOOL_OPTIONS="$JAVA_TOOL_OPTIONS -Dfile.encoding=UTF-8"
+
publisher=$input_cache_path/$publisher_jar
if test -f "$publisher"; then
java -jar $publisher -ig . $txoption $*
diff --git a/_updatePublisher.bat b/_updatePublisher.bat
index c89247652..67aebf583 100644
--- a/_updatePublisher.bat
+++ b/_updatePublisher.bat
@@ -216,4 +216,4 @@ start copy /y "_updatePublisher.new.bat" "_updatePublisher.bat" ^&^& del "_updat
IF "%skipPrompts%"=="true" (
PAUSE
-}
\ No newline at end of file
+)
diff --git a/_updatePublisher.sh b/_updatePublisher.sh
index e28128be6..0f9ecbed9 100755
--- a/_updatePublisher.sh
+++ b/_updatePublisher.sh
@@ -31,11 +31,7 @@ while [ "$#" -gt 0 ]; do
done
echo "Checking internet connection"
-case "$OSTYPE" in
- linux-gnu* ) ping tx.fhir.org -4 -c 1 -w 1000 >/dev/null ;;
- darwin* ) ping tx.fhir.org -c 1 >/dev/null ;;
- *) echo "unknown: $OSTYPE"; exit 1 ;;
-esac
+curl -sSf tx.fhir.org > /dev/null
if [ $? -ne 0 ] ; then
echo "Offline (or the terminology server is down), unable to update. Exiting"
@@ -121,13 +117,16 @@ if [[ $skipPrompts == true ]] || [[ $response =~ ^[yY].*$ ]]; then
curl -L $gencont_sh_url -o /tmp/_gencontinuous.new
cp /tmp/_gencontinuous.new _gencontinuous.sh
+ chmod +x _gencontinuous.sh
rm /tmp/_gencontinuous.new
curl -L $gen_sh_url -o /tmp/_genonce.new
cp /tmp/_genonce.new _genonce.sh
+ chmod +x _genonce.sh
rm /tmp/_genonce.new
curl -L $update_sh_url -o /tmp/_updatePublisher.new
cp /tmp/_updatePublisher.new _updatePublisher.sh
+ chmod +x _updatePublisher.sh
rm /tmp/_updatePublisher.new
fi
diff --git a/ig.ini b/ig.ini
index 9d95930c2..2c49e3ee3 100644
--- a/ig.ini
+++ b/ig.ini
@@ -2,9 +2,9 @@
# ini file for the Implementation Guide publisher
# see comments below for instructions
-ig = fsh-generated/resources/ImplementationGuide-my-ig.json
-#template = openhie.fhir.template#current
-template = #local-template
+ig = fsh-generated/resources/ImplementationGuide-openhie.fhir.zambia-immunizations.json
+template = openhie.fhir.template#current
+#template = #local-template
diff --git a/input/fsh/conceptmaps/client-registration.fsh b/input/fsh/conceptmaps/client-registration.fsh
new file mode 100644
index 000000000..1e143271a
--- /dev/null
+++ b/input/fsh/conceptmaps/client-registration.fsh
@@ -0,0 +1,63 @@
+Instance: AdministrativeSexToAdministrativeGender
+InstanceOf: ConceptMap
+Title: "Administrative Sex To Administrative Gender"
+Description: "Mapping to and from FHIR Administrative Sex coding to FHIR Administrative Gender."
+Usage: #definition
+
+* name = "AdministrativeSexToAdministrativeGender"
+* description = "Mapping to and from FHIR Administrative Sex coding to FHIR Administrative Gender."
+* title = "ConceptMap to and From administrative sex to administrative gender"
+* status = #active
+* experimental = false
+* date = "2024-01-30"
+
+* group[+]
+ * source = $SEX
+ * target = $GENDER
+ * insert ElementMap(M, male, equivalent)
+ * insert ElementMap(F, female, equivalent)
+
+* group[+]
+ * source = $GENDER
+ * target = $SEX
+ * insert ElementMap(male, M, equivalent)
+ * insert ElementMap(female, F, equivalent)
+
+Instance: PropietaryEducationLevelToLOINCEducationLevel
+InstanceOf: ConceptMap
+Title: "Propietary Education Level to LOINC Education Level"
+Description: "Mapping to and from Propietary Education Level to LOINC Education Level."
+Usage: #definition
+
+* name = "PropietaryEducationLevelToLOINCEducationLevel"
+* description = "Mapping to and from Propietary Education Level to LOINC Education Level."
+* title = "ConceptMap to and From propietary education level to LOINC education Level"
+* status = #active
+* experimental = false
+* date = "2024-01-31"
+
+* group[+]
+ * source = $PROPRIETARY_EDU_LEVEL
+ * target = $LNC
+ * insert ElementMap(CertificateGraduate, LA30193-9, equivalent)
+ * insert ElementMap(DegreeGraduate, LA42-7, equivalent)
+ * insert ElementMap(DiplomaGraduate, LA32469-1, equivalent)
+ * insert ElementMap(JuniorSecondary, LA36-9, equivalent)
+ * insert ElementMap(MastersGraduate, LA12461-2, equivalent)
+ * insert ElementMap(NoFormalEducation, LA35-1, equivalent)
+ * insert ElementMap(PhDGraduate, LA30185-5, equivalent)
+ * insert ElementMap(Primary, LA32466-7, equivalent)
+ * insert ElementMap(SeniorSecondary, LA37-7, equivalent)
+
+* group[+]
+ * source = $LNC
+ * target = $PROPRIETARY_EDU_LEVEL
+ * insert ElementMap(LA30193-9, CertificateGraduate, equivalent)
+ * insert ElementMap(LA42-7, DegreeGraduate, equivalent)
+ * insert ElementMap(LA32469-1, DiplomaGraduate, equivalent)
+ * insert ElementMap(LA36-9, JuniorSecondary, equivalent)
+ * insert ElementMap(LA12461-2, MastersGraduate, equivalent)
+ * insert ElementMap(LA35-1, NoFormalEducation, equivalent)
+ * insert ElementMap(LA30185-5, PhDGraduate, equivalent)
+ * insert ElementMap(LA32466-7, Primary, equivalent)
+ * insert ElementMap(LA37-7, SeniorSecondary, equivalent)
\ No newline at end of file
diff --git a/input/fsh/examples.fsh b/input/fsh/examples.fsh
index e69de29bb..616f95822 100644
--- a/input/fsh/examples.fsh
+++ b/input/fsh/examples.fsh
@@ -0,0 +1,20 @@
+Instance: HImmunizationPatientExample
+InstanceOf: ImmunizationPatient
+Usage: #example
+Title: "Immunization Patient"
+Description: "Is used to document demographics and other administrative information about an individual receiving care or other health-related services."
+* identifier[NUPIN][+].value = "12-999-22-2338"
+* identifier[NUPIN][=].system = "http://openhie.org/fhir/zambia-immunizations/identifier/nupin"
+* identifier[NRC][+].value = "12-999-22-2338"
+* identifier[NRC][=].system = "http://openhie.org/fhir/zambia-immunizations/identifier/nrc"
+* name[+].use = #official
+* name[=].family = "Smith"
+* name[=].given[+] = "Jane"
+* name[=].given[+] = "Maria"
+* gender = #female
+* birthDate = "1990-12-12"
+* birthDate.extension[birthTime].valueDateTime = "1983-05-22T16:40:17+02:00"
+* extension[BIZ].valueBoolean = true
+* extension[IsEstimatedDOB].valueBoolean = false
+* extension[EducationLevelAttained].valueCodeableConcept.coding.code = $LNC#LA42-7
+* extension[EducationLevelAttained].valueCodeableConcept.coding.system = "http://loinc.org"
\ No newline at end of file
diff --git a/input/fsh/extensions.fsh b/input/fsh/extensions.fsh
new file mode 100644
index 000000000..713639ce0
--- /dev/null
+++ b/input/fsh/extensions.fsh
@@ -0,0 +1,29 @@
+Extension: BornInZambia
+Id: born-in-zambia
+Title: "Patient born in Zambia?"
+Description: "This is an extension to capture whether the patient was born in Zambia."
+* value[x] only boolean
+* value[x] 1..
+* ^context[+].type = #element
+* ^context[=].expression = "Patient"
+
+Extension: IsEstimatedDateOfBirth
+Id: is-estimated-date-of-birth
+Title: "Patient's Date of Birth Is Estimated?"
+Description: "This is an extension to capture whether the patient's date of birth was estimated."
+* value[x] only boolean
+* value[x] 1..
+* ^context[+].type = #element
+* ^context[=].expression = "Patient"
+
+Extension: EducationLevelAttained
+Id: education-level-attained
+Title: "Patient's highest education level attained"
+Description: "A list of education levels."
+* value[x] only CodeableConcept
+* valueCodeableConcept from VSLOINCEducationLevelAttained (required)
+* valueCodeableConcept.text = "Highest education level attained"
+* valueCodeableConcept.coding.system 1..1
+* valueCodeableConcept.coding.code 1..1
+* ^context[0].type = #element
+* ^context[0].expression = "Patient"
\ No newline at end of file
diff --git a/input/fsh/profiles.fsh b/input/fsh/profiles.fsh
deleted file mode 100644
index e69de29bb..000000000
diff --git a/input/fsh/rulesets/client-registration.fsh b/input/fsh/rulesets/client-registration.fsh
new file mode 100644
index 000000000..5f64be7e3
--- /dev/null
+++ b/input/fsh/rulesets/client-registration.fsh
@@ -0,0 +1,6 @@
+RuleSet: ElementMap(source, target, equivalence)
+* element[+]
+ * code = #{source}
+ * target[+]
+ * code = #{target}
+ * relationship = #{equivalence}
diff --git a/input/fsh/smartcare.fsh b/input/fsh/smartcare.fsh
new file mode 100644
index 000000000..88664cf7f
--- /dev/null
+++ b/input/fsh/smartcare.fsh
@@ -0,0 +1,54 @@
+Invariant: NUPIN-NRC-SmartcareID-1
+Description: "Only letters, special characters (dash) and numbers are allowed."
+Expression: "$this.matches('[A-Za-z0-9-]*')"
+Severity: #error
+
+Profile: ImmunizationPatient
+Parent: Patient
+Id: immunization-patient
+Title: "Patient Profile for Immunizations"
+Description: "Is used to document demographics and other administrative information about an individual receiving care or other health-related services."
+* identifier 1..*
+* identifier ^slicing.discriminator.type = #value
+* identifier ^slicing.discriminator.path = "system"
+* identifier ^slicing.rules = #open
+* identifier ^slicing.ordered = false
+* identifier ^slicing.description = "Slice based on the type of identifier."
+* identifier contains
+ NUPIN 1..1 and
+ NRC 0..1 MS
+
+* identifier[NUPIN].value 1..1
+ * obeys NUPIN-NRC-SmartcareID-1
+* identifier[NUPIN].system 1..1
+* identifier[NUPIN].system = "http://openhie.org/fhir/zambia-immunizations/identifier/nupin"
+
+* identifier[NRC] ^definition =
+ "reason(s) why this should be supported."
+* identifier[NRC].value 1..1
+ * obeys NUPIN-NRC-SmartcareID-1
+* identifier[NRC].system 1..1
+* identifier[NRC].system = "http://openhie.org/fhir/zambia-immunizations/identifier/nrc"
+
+* name 1..*
+* name.given 1..*
+* name.family 1..1
+* name.use 1..1
+
+* gender 1..1
+* birthDate 1..1
+* birthDate.extension contains patient-birthTime named birthTime 0..1 MS
+* birthDate.extension[birthTime] ^definition =
+ "reason(s) why this should be supported."
+
+* address.district 0..1 MS
+* address.district ^definition =
+ "reason(s) why this should be supported."
+
+* extension contains BornInZambia named BIZ 1..1
+* extension contains IsEstimatedDateOfBirth named IsEstimatedDOB 0..1 MS
+* extension[IsEstimatedDOB] ^definition =
+ "reason(s) why this should be supported."
+* extension contains EducationLevelAttained named EduLevelAttained 0..1 MS
+* extension[EduLevelAttained] ^definition =
+ "reason(s) why this should be supported."
\ No newline at end of file
diff --git a/input/fsh/terminology.fsh b/input/fsh/terminology.fsh
index e69de29bb..176fdf088 100644
--- a/input/fsh/terminology.fsh
+++ b/input/fsh/terminology.fsh
@@ -0,0 +1,44 @@
+Alias: $LNC = http://loinc.org
+
+Alias: $GENDER = http://hl7.org/fhir/administrative-gender
+Alias: $SEX = http://terminology.hl7.org/CodeSystem/v2-0001
+
+Alias: $PROPRIETARY_EDU_LEVEL = http://openhie.org/fhir/zambia-immunizations/CodeSystem/cs-propietary-education-level-attained
+
+CodeSystem: CSPropietaryEducationLevelAttained
+Id: cs-propietary-education-level-attained
+Title: "Patient's highest education level attained (Propietary)"
+Description: "A list of propietary education levels."
+* ^experimental = false
+* ^caseSensitive = true
+* #CertificateGraduate "Certificate Graduate" "The description"
+* #DegreeGraduate "Degree Graduate" "The description"
+* #DiplomaGraduate "Diploma Graduate" "The description"
+* #JuniorSecondary "Junior Secondary" "The description"
+* #MastersGraduate "Masters Graduate" "The description"
+* #NoFormalEducation "No Formal Education" "The description"
+* #PhDGraduate "PhD Graduate" "The description"
+* #Primary "Primary" "The description"
+* #SeniorSecondary "Senior Secondary" "The description"
+
+ValueSet: VSPropietaryEducationLevelAttained
+Id: vs-propietary-education-level-attained
+Title: "Patient's highest education level attained (Propietary)"
+Description: "A list of propietary education levels."
+* ^experimental = false
+* include codes from system CSPropietaryEducationLevelAttained
+
+ValueSet: VSLOINCEducationLevelAttained
+Id: vs-loinc-education-level-attained
+Title: "Patient's highest education level attained (LOINC)"
+Description: "A list of LOINC education levels."
+* ^experimental = false
+* $LNC#LA35-1 "No schooling"
+* $LNC#LA42-7 "Graduate degree"
+* $LNC#LA30193-9 "More than high school"
+* $LNC#LA32469-1 "University undergraduate degree"
+* $LNC#LA32466-7 "Primary school education"
+* $LNC#LA36-9 "8th grade/less"
+* $LNC#LA37-7 "9-11 grades"
+* $LNC#LA12461-2 "Master's degree (e.g., MA, MS, MEng, MEd, MSW, MBA)"
+* $LNC#LA30185-5 "Doctoral degree (e.g., PhD, EdD)"
\ No newline at end of file
diff --git a/input/maps/AdministrativeSexToAdministrativeGender.fml b/input/maps/AdministrativeSexToAdministrativeGender.fml
new file mode 100644
index 000000000..1e304224e
--- /dev/null
+++ b/input/maps/AdministrativeSexToAdministrativeGender.fml
@@ -0,0 +1,12 @@
+/// url = 'http://openhie.org/fhir/zambia-immunizations/StructureMap/AdministrativeSexToAdministrativeGender'
+/// name = 'AdministrativeSexToAdministrativeGender'
+/// description = 'Maps the Administrative Sex codes To Administrative Gender codes.'
+/// title = 'Administrative Sex To Administrative Gender'
+/// status = 'active'
+
+uses "http://openhie.org/fhir/zambia-immunizations/StructureDefinition/immunization-patient" alias PatientProfile as source
+uses "http://openhie.org/fhir/zambia-immunizations/StructureDefinition/immunization-patient" alias Patient as target
+
+group SetPatientGender(source pat : PatientProfile, target patient : Patient) {
+ pat.gender as gender -> patient.gender = translate(gender, 'http://openhie.org/fhir/zambia-immunizations/ConceptMap/AdministrativeSexToAdministrativeGender', 'code') "SetGender";
+}
\ No newline at end of file
diff --git a/input/maps/PropietaryEducationLevelToLOINCEducationLevel.fml b/input/maps/PropietaryEducationLevelToLOINCEducationLevel.fml
new file mode 100644
index 000000000..2d55f2b50
--- /dev/null
+++ b/input/maps/PropietaryEducationLevelToLOINCEducationLevel.fml
@@ -0,0 +1,14 @@
+/*/// url = 'http://openhie.org/fhir/zambia-immunizations/StructureMap/PropietaryEducationLevelToLOINCEducationLevel'
+/// name = 'PropietaryEducationLevelToLOINCEducationLevel'
+/// description = 'Maps the Propietary Educational Level codes To LOINC Educational Level codes.'
+/// title = 'Propietary Educational Level To LOINC Educational Level'
+/// status = 'active'
+
+uses "http://openhie.org/fhir/zambia-immunizations/StructureDefinition/immunization-patient" alias PatientProfile as source
+uses "http://openhie.org/fhir/zambia-immunizations/StructureDefinition/immunization-patient" alias Patient as target
+
+group SetPatientEducationalLevel(source pat : PatientProfile, target patient : Patient) {
+ pat.extension:EduLevelAttained as eduLevelAttained -> patient as patty then {
+ //eduLevelAttained -> patty.code = translate(eduLevelAttained, 'http://openhie.org/fhir/zambia-immunizations/ConceptMap/PropietaryEducationLevelToLOINCEducationLevel', 'code') "SetEducationalLevel";
+ }
+}*/
\ No newline at end of file
diff --git a/input/pagecontent/index.xml b/input/pagecontent/index.xml
index cb410a256..cba5a8c84 100644
--- a/input/pagecontent/index.xml
+++ b/input/pagecontent/index.xml
@@ -28,11 +28,48 @@
licensing requirements may limit the systems that data captured using certain questionnaires may be shared with.
-
- Disclaimer
-
- The specification herewith documented is a demo working specification, and may not be used for any implementation purposes.
- This draft is provided without warranty of completeness or consistency, and the official publication supersedes this draft.
+
Download
+ You can also download:
+
+
+ The source code for this Implementation Guide can be found on OpenHIE GitHub.
+
+ Cross Version Analysis
+
+ {% include cross-version-analysis.xhtml %}
+
+
+ Dependency Table
+
+ {% include dependency-table.xhtml %}
+
+
+ Globals Table
+
+ {% include globals-table.xhtml %}
+
+
+ IP Statements
+
+ {% include ip-statements.xhtml %}
+
+
+Intellectual Property Considerations
+
+ While this implementation guide and the underlying FHIR are licensed as public domain, this guide may include examples making use of terminologies such
+ as LOINC, SNOMED CT and others which have more restrictive licensing requirements. Implementers should make themselves familiar with licensing and
+ any other constraints of terminologies, questionnaires, and other components used as part of their implementation process. In some cases,
+ licensing requirements may limit the systems that data captured using certain questionnaires may be shared with.
+
+
+ Disclaimer
+
+ This specification is provided without warranty of completeness or consistency, and the official publication supersedes this draft.
No liability can be inferred from the use or misuse of this specification, or its consequences.
+
\ No newline at end of file
diff --git a/local-template/package/.index.db b/local-template/package/.index.db
new file mode 100644
index 000000000..acb32ab9f
Binary files /dev/null and b/local-template/package/.index.db differ
diff --git a/local-template/package/.index.json b/local-template/package/.index.json
new file mode 100644
index 000000000..7ee6e2c5c
--- /dev/null
+++ b/local-template/package/.index.json
@@ -0,0 +1,4 @@
+{
+ "index-version" : 2,
+ "files" : []
+}
diff --git a/local-template/package/content/.index.db b/local-template/package/content/.index.db
new file mode 100644
index 000000000..acb32ab9f
Binary files /dev/null and b/local-template/package/content/.index.db differ
diff --git a/local-template/package/content/.index.json b/local-template/package/content/.index.json
new file mode 100644
index 000000000..7ee6e2c5c
--- /dev/null
+++ b/local-template/package/content/.index.json
@@ -0,0 +1,4 @@
+{
+ "index-version" : 2,
+ "files" : []
+}
diff --git a/local-template/package/content/assets/.index.db b/local-template/package/content/assets/.index.db
new file mode 100644
index 000000000..acb32ab9f
Binary files /dev/null and b/local-template/package/content/assets/.index.db differ
diff --git a/local-template/package/content/assets/.index.json b/local-template/package/content/assets/.index.json
new file mode 100644
index 000000000..7ee6e2c5c
--- /dev/null
+++ b/local-template/package/content/assets/.index.json
@@ -0,0 +1,4 @@
+{
+ "index-version" : 2,
+ "files" : []
+}
diff --git a/local-template/package/content/assets/css/.index.db b/local-template/package/content/assets/css/.index.db
new file mode 100644
index 000000000..acb32ab9f
Binary files /dev/null and b/local-template/package/content/assets/css/.index.db differ
diff --git a/local-template/package/content/assets/css/.index.json b/local-template/package/content/assets/css/.index.json
new file mode 100644
index 000000000..7ee6e2c5c
--- /dev/null
+++ b/local-template/package/content/assets/css/.index.json
@@ -0,0 +1,4 @@
+{
+ "index-version" : 2,
+ "files" : []
+}
diff --git a/local-template/package/includes/.index.db b/local-template/package/includes/.index.db
new file mode 100644
index 000000000..acb32ab9f
Binary files /dev/null and b/local-template/package/includes/.index.db differ
diff --git a/local-template/package/includes/.index.json b/local-template/package/includes/.index.json
new file mode 100644
index 000000000..7ee6e2c5c
--- /dev/null
+++ b/local-template/package/includes/.index.json
@@ -0,0 +1,4 @@
+{
+ "index-version" : 2,
+ "files" : []
+}
diff --git a/sushi-config.yaml b/sushi-config.yaml
index a0f3edf32..426e6a084 100644
--- a/sushi-config.yaml
+++ b/sushi-config.yaml
@@ -7,21 +7,21 @@
# ╰────────────────────────────────────────────────────────────────────────────────────────────────╯
-id: my-ig
-canonical: http://example.com/fhir/example
-url: http://example.com/fhir/example
-name: ExampleIG
-title: "HL7 FHIR Implementation Guide: Example IG Release 1 - US Realm | STU1"
-description: Example IG exercises many of the fields in a SUSHI configuration.
+id: openhie.fhir.zambia-immunizations
+canonical: http://openhie.org/fhir/zambia-immunizations
+url: http://openhie.org/fhir/zambia-immunizations/ImplementationGuide/openhie.fhir.zambia-immunizations
+name: ZambiaImmunizationsIG
+title: "Zambia Immunizations FHIR Implementation Guide"
+description: Zambia Immunizations FHIR Implementation Guide.
status: active
license: CC0-1.0
-date: 2020-02-26
+date: 2024-01-30
version: 1.0.0
# Although fhirVersions is 0..* in the ImplementationGuide resource
# it can be a single item OR and array here, but the current tooling
# only supports one FHIR version per Implementation Guide
-fhirVersion: 4.0.1
+fhirVersion: 5.0.0
# The following two lines correspond to items that used to be in
# ig.ini but were moved to IG.definition.parameter. For
@@ -37,16 +37,16 @@ releaseLabel: STU1
# as IG.publisher. The contact details and/or additional publishers
# will be translated into IG.contact values.
publisher:
- name: My Organization
- url: http://example.com/committees
- email: my-group@example.com
+ name: Jembi Health Systems
+ url: https://www.jembi.org
+ email: info@jembi.org
# ContactDetail is required by the template.
contact:
- - name: Bob Smith
+ - name: Richard Langford
telecom:
- system: email
- value: bobsmith@example.com
+ value: richard.langford@jembi.org
use: work
# The jurisdiction can be a single item or a list. The FHIR Shorthand