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TB-201 Update JeMPI Docker Images Environment Variables #254

Merged
merged 33 commits into from
Oct 17, 2023
Merged

TB-201 Update JeMPI Docker Images Environment Variables #254

merged 33 commits into from
Oct 17, 2023

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MatthewErispe
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@MatthewErispe MatthewErispe marked this pull request as ready for review October 5, 2023 08:42
@MatthewErispe MatthewErispe requested review from arran-standish and nour-borgi and removed request for arran-standish October 5, 2023 08:47
MatthewErispe and others added 16 commits October 5, 2023 10:50
@MatthewErispe
TB-204 update config with LINKER_HOST var
b376ba3
@MatthewErispe
TB-207 update controller env vars
e952de7
@MatthewErispe
TB-210 remove old jempi images and config
2768d9e
@MatthewErispe
TB-208 create etl image and config
7a1ea7c
@MatthewErispe
TB-205 create shared volume for csv upload/import
dcb6c06
@MatthewErispe
TB-215 update jempi web config
e93342f
@MatthewErispe
TB-201 update jempi notifications script and jempi kafka topics
dcefccf
@MatthewErispe
TB-205 update jempi image tags
7d6b505
@bradsawadye
Add the mapings for search, update and create
dd6d401 
These will map the fhir paylod into jempi format as well as map th jempi response into fhir format
@bradsawadye
Add the dependencies used by the client registry
267aaf2
@bradsawadye
Run the importer scripts that add the mappoings to the mapping mediator
010f03a
@bradsawadye
Add the hapi fhir network to the mapping mediator as well as bump the…
9355229 
… image version

This is so the mediator is able to send data to hapi fhir
@bradsawadye
Fix bugs and typos
28bee6b
@bradsawadye
Fix bug
9f82360 
Add closing bracket
@bradsawadye
Merge branch 'TB-201-update-jempi-config' of github.com:jembi/platfor…
93860ca 
…m into TB-201-update-jempi-config
@bradsawadye
Bump the platform version
e189ba0
@bradsawadye bradsawadye marked this pull request as draft October 10, 2023 13:24
@bradsawadye
Add documentation
5050bd6 
This adds information on how to create, read and update patients via the JeMPI api or through the mapping mediator (in fhir format)
@bradsawadye
Merge branch 'TB-201-update-jempi-config' of github.com:jembi/platfor…
33791d8 
…m into TB-201-update-jempi-config
@bradsawadye bradsawadye marked this pull request as ready for review October 11, 2023 06:59
@MatthewErispe MatthewErispe marked this pull request as ready for review October 11, 2023 17:24
@MatthewErispe MatthewErispe marked this pull request as draft October 12, 2023 03:57
@MatthewErispe MatthewErispe marked this pull request as ready for review October 12, 2023 04:14
@MatthewErispe MatthewErispe marked this pull request as draft October 12, 2023 04:40
@MatthewErispe MatthewErispe marked this pull request as ready for review October 12, 2023 04:40
@MatthewErispe MatthewErispe marked this pull request as draft October 12, 2023 08:04
@MatthewErispe MatthewErispe marked this pull request as ready for review October 12, 2023 08:04
@bradsawadye
Add the keyclock network to the jempi web
67b967a 
For the web to communicate with keycloak
@bradsawadye bradsawadye marked this pull request as draft October 12, 2023 10:31
@bradsawadye bradsawadye marked this pull request as ready for review October 12, 2023 10:31
@bradsawadye
Add mappings for the jempi endpoint for retrieving the patients
b619dbc 
This adds mappings that will be used in the mapping mediator for mapping the jempi patient into fhir format

TB-180
@bradsawadye
Update the readme with instructions for retrieving patients in jempi …
3312c58 
…and fhir format

TB-180
@bradsawadye
Increase the timeout for the tests
c0b6245 
The number of packages to be tested has increased and it now takes long for the tests to finish
@bradsawadye bradsawadye marked this pull request as draft October 16, 2023 15:51
@bradsawadye bradsawadye marked this pull request as ready for review October 16, 2023 15:51
@bradsawadye bradsawadye marked this pull request as draft October 16, 2023 16:02
@bradsawadye bradsawadye marked this pull request as ready for review October 16, 2023 16:02
@bradsawadye bradsawadye marked this pull request as draft October 17, 2023 07:12
@bradsawadye bradsawadye marked this pull request as ready for review October 17, 2023 07:13
@brett-onions brett-onions self-requested a review October 17, 2023 07:55
brett-onions
brett-onions approved these changes Oct 17, 2023
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LGTM

nour-borgi
nour-borgi approved these changes Oct 17, 2023
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LGTM

@MatthewErispe MatthewErispe merged commit 7e241fb into main Oct 17, 2023
8 checks passed
@MatthewErispe MatthewErispe deleted the TB-201-update-jempi-config branch October 17, 2023 09:06
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@bradsawadye bradsawadye bradsawadye left review comments

@nour-borgi nour-borgi nour-borgi approved these changes

@brett-onions brett-onions brett-onions approved these changes

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4 participants
@MatthewErispe @bradsawadye @brett-onions @nour-borgi