From 547246b8313b0e5972e90510a1619feac25cb910 Mon Sep 17 00:00:00 2001 From: Jonas Fuchs <78491186+jonas-fuchs@users.noreply.github.com> Date: Wed, 24 Jan 2024 15:51:36 +0100 Subject: [PATCH] removed variable assignment for blast process --- varvamp/scripts/blast.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/varvamp/scripts/blast.py b/varvamp/scripts/blast.py index fc86dce..f1dd188 100644 --- a/varvamp/scripts/blast.py +++ b/varvamp/scripts/blast.py @@ -87,7 +87,7 @@ def run_BLAST(query, blast_db, data_dir, n_threads): args.append('-' + k) args.append(str(v)) # run BLAST - proc = subprocess.run(args, capture_output=True, check=True) + subprocess.run(args, capture_output=True, check=True) return blast_out