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setup.cfg
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[metadata]
url = https://github.com/tigrlab/datman
author = The TIGRLab
author_email = [email protected]
maintainer = Dawn Smith
maintainer_email = [email protected]
description = datman is a set of scripts for managing MRI data in XNAT, metadata in REDCap and performing visual quality control.
long_description = file:README.rst
long_description_content_type = text/x-rst; charset=UTF-8
license = Apache License, Version 2.0
classifiers =
Development Status :: 4 - Beta
Environment :: Console
Intended Audience :: Science/Research
Topic :: Scientific/Engineering :: Image Recognition
License :: OSI Approved :: BSD License
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
[options]
python_requires = >=3.6
install_requires =
docopt ~= 0.6.2
matplotlib ~= 3.1.2
nibabel ~= 3.0.0
numpy ~= 1.18.0
pandas ~= 0.25.3
pybids ~= 0.10.0
pydicom ~= 1.3.0
pysftp ~= 0.2.9
pyxnat ~= 1.2.1.0.post3
pyyaml ~= 5.2
requests ~= 2.22.0
urllib3 ~= 1.25.7
wrapt ~= 1.11.2
test_requires =
codecov
coverage
mock
pytest
packages = find:
include_package_data = True
[options.exclude_package_data]
* = tests
[options.extras_require]
doc =
nbsphinx
packaging
pydot >= 1.2.3
pydotplus
sphinx >= 2.1.2
sphinx_rtd_theme
sphinxcontrib-apidoc ~= 0.3.0
sphinxcontrib-napoleon
sphinxcontrib-versioning
docs =
%(doc)s
duecredit = duecredit
resmon = psutil >=5.4
style =
flake8 >= 3.7.0
test =
pytest >= 4.4
pytest-xdist >= 1.28
pytest-cov
mock
coverage
tests =
%(test)s
all =
%(doc)s
%(duecredit)s
%(resmon)s
%(tests)s
[options.package_data]
datman =
VERSION
[versioneer]
VCS = git
style = pep440
versionfile_source = datman/_version.py
versionfile_build = datman/_version.py
tag_prefix =
parentdir_prefix =
[flake8]
max-line-length = 80
doctests = False
exclude=
*build/
docs/
select = C,E,F,W,B,B950
ignore = N802,N806,W503,W504,E203
putty-ignore =
*/__init__.py : +F401
docs/conf.py : +E265
/^\s*\.\. _.*?: http/ : +E501
[isort]
line_length = 80
indent=' '
multi_line_output=6
[tool:pytest]
norecursedirs = .* _*
addopts = -vx --doctest-modules
doctest_optionflags = ALLOW_UNICODE NORMALIZE_WHITESPACE
env =
PYTHONHASHSEED=0
filterwarnings =
ignore::DeprecationWarning
junit_family = xunit2
python_files="tests/*.py"