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rbd_region_overlapping_subsequences.txt
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rbd_region_overlapping_subsequences.txt
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50mers, 25aa overlap
NENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRF
SFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWN
PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKC
RKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRG
YGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDF
DEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYR
TGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTP
LFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVG
CNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKK
YQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTE
ATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIAD (33aa overlap with prior sequence)
40mers, 20aa overlap
NENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFR
KCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFG
VQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRIS
EVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKC
NCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADS
YGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIA
FVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSN
DYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKS
NLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTP
NLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQP
CNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLH
TNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCV
APATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKF
NLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIAD (28aa overlap with prior sequence)
30mers, 15aa overlap
NENGTITDAVDCALDPLSETKCTLKSFTVE
PLSETKCTLKSFTVEKGIYQTSNFRVQPTE
KGIYQTSNFRVQPTESIVRFPNITNLCPFG
SIVRFPNITNLCPFGEVFNATRFASVYAWN
EVFNATRFASVYAWNRKRISNCVADYSVLY
RKRISNCVADYSVLYNSASFSTFKCYGVSP
NSASFSTFKCYGVSPTKLNDLCFTNVYADS
TKLNDLCFTNVYADSFVIRGDEVRQIAPGQ
FVIRGDEVRQIAPGQTGKIADYNYKLPDDF
TGKIADYNYKLPDDFTGCVIAWNSNNLDSK
TGCVIAWNSNNLDSKVGGNYNYLYRLFRKS
VGGNYNYLYRLFRKSNLKPFERDISTEIYQ
NLKPFERDISTEIYQAGSTPCNGVEGFNCY
AGSTPCNGVEGFNCYFPLQSYGFQPTNGVG
FPLQSYGFQPTNGVGYQPYRVVVLSFELLH
YQPYRVVVLSFELLHAPATVCGPKKSTNLV
APATVCGPKKSTNLVKNKCVNFNFNGLTGT
KNKCVNFNFNGLTGTGVLTESNKKFLPFQQ
NFNGLTGTGVLTESNKKFLPFQQFGRDIAD (23aa overlap with prior sequence)
20mers, 10aa overlap
NENGTITDAVDCALDPLSET
DCALDPLSETKCTLKSFTVE
KCTLKSFTVEKGIYQTSNFR
KGIYQTSNFRVQPTESIVRF
VQPTESIVRFPNITNLCPFG
PNITNLCPFGEVFNATRFAS
EVFNATRFASVYAWNRKRIS
VYAWNRKRISNCVADYSVLY
NCVADYSVLYNSASFSTFKC
NSASFSTFKCYGVSPTKLND
YGVSPTKLNDLCFTNVYADS
LCFTNVYADSFVIRGDEVRQ
FVIRGDEVRQIAPGQTGKIA
IAPGQTGKIADYNYKLPDDF
DYNYKLPDDFTGCVIAWNSN
TGCVIAWNSNNLDSKVGGNY
NLDSKVGGNYNYLYRLFRKS
NYLYRLFRKSNLKPFERDIS
NLKPFERDISTEIYQAGSTP
TEIYQAGSTPCNGVEGFNCY
CNGVEGFNCYFPLQSYGFQP
FPLQSYGFQPTNGVGYQPYR
TNGVGYQPYRVVVLSFELLH
VVVLSFELLHAPATVCGPKK
APATVCGPKKSTNLVKNKCV
STNLVKNKCVNFNFNGLTGT
NFNFNGLTGTGVLTESNKKF
GVLTESNKKFLPFQQFGRDI
LTESNKKFLPFQQFGRDIAD (18aa overlap with prior sequence)