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Potential references

Kai Blumberg edited this page Oct 4, 2017 · 29 revisions

Links to references which may be useful for my thesis and subsequent work.

Introduction

Planetary Boundaries: Exploring the Safe Operating Space for Humanity paper DOI: 10.5751/ES-03180-140232 One of my favorite papers about the thresholds of boundaries for sustainable existence on earth.

The FAIR Guiding Principles for scientific data management and stewardship doi:10.1038/sdata.2016.18

Policy and SDGIOs

Making Marine Life Count: A New Baseline for Policy DOI: 10.1371/journal.pbio.1000531 From Pier about Ocean policy.

DOOS Consultative Draft no DOI for insight into functions that can be understood as ecosystem services of the deep, and thus linked to natural capital.

Ontology

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration doi:10.1038/nbt1346

The environment ontology: contextualising biological and biomedical entities doi:10.1186/2041-1480-4-43

The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation DOI 10.1186/s13326-016-0097-6

Gene Ontology: tool for the unification of biology doi:10.1038/75556

FRAM & HAUSGARTEN

HAUSGARTEN: Multidisciplinary investigations at a deep-sea, long-term observatory in the Arctic Ocean DOI: 10.5670/oceanog.2005.24 HAUSGARTEN introduction.

FRAM-FRontiers in Arctic marine Monitoring Visions for permanent observations in a gateway to the Arctic Ocean DOI: 10.1109/OCEANS-Bergen.2013.6608008

AWI data sets

litterbase reference publication DOI: 10.1016/B978-0-12-812271-6.00104-6 Publication to go with AWI litter base data, if I work on ontologizing marine litter.

Citizen scientists reveal: Marine litter pollutes Arctic beaches and affects wild life DOI: 10.1016/j.marpolbul.2017.09.055 paper associated with marine litter data set.

Natural variability or anthropogenically-induced variation? DOI: 10.1016/j.ecolind.2015.10.001 AWI publication looking at interdisciplinary data, could work well with the awi dataset linking endevor.

Biogeography of Deep-Sea Benthic Bacteria at Regional Scale (LTER HAUSGARTEN, Fram Strait, Arctic) DOI: 10.1371/journal.pone.0072779 paper for the FRAM Bacterial sequence information by Marianne Jacob from our group.

Particle sedimentation patterns in the eastern Fram Strait during 2000–2005 DOI: 10.1016/j.dsr.2009.04.011 Biogenic particle flux paper associated with the data set.

Lateral supply and downward export of particulate matter from upper waters to the seafloor in the deep eastern Fram Strait DOI: 10.1016/j.dsr.2016.04.014 This paper may also help later to make the connection between surface plankton and particle flux

Dynamic benthic megafaunal communities: Assessing temporal variations in structure, composition and diversity at the Arctic deep-sea observatory HAUSGARTEN between 2004 and 2015 DOI: 10.1016/j.dsr.2017.02.008 paper with Diversity of benthic megafaunal communities data set.

Physical and ecological processes at a moving ice edge in the Fram Strait as observed with an AUV DOI:10.1016/j.dsr.2016.07.001 cites the Inorganic nutrients data and could possibly serve as some interesting links.

Exchange of warming deep waters across Fram Strait DOI:10.1016/j.dsr.2015.06.003 which seems to be a relevant use of the AWI physical oceanography and current meter data

Influence of snow depth and surface flooding on light transmission through Antarctic pack ice DOI:10.1002/2016JC012325 associated with AWI ice data.

plankton ecology

Sea-ice retreat controls timing of summer plankton blooms in the Eastern Arctic Ocean DOI:10.1002/2016GL071232 Ideas presented by Christina at the 28.09.17 lab meeting, concerning sea ice retreat and algal arctic bloom processes.

Diatom Phenology in the Southern Ocean: Mean Patterns, Trends and the Role of Climate Oscillations DOI:10.3390/rs8050420 Associated with the plankton ecology project using Tillman satellite chlorophyll data and the plankton bloom ontology classes.

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