NEWS

Changes in version 2.19.1 (2024-04-18)
+ fix problem with getGenomePairs function after OMA API change

Changes in version 2.7.1 (2020-11-11)
+ fix problem after OMA API version change

Changes in version 1.99.3 (2019-04-15)
+ update format of NEWS file

Changes in version 1.99.2 (2019-03-13)
+ re-license under GPLv3
+ updated ipython notebook with examples from manuscript to new release of OMA browser
+ improve package according to bioconductor guidelines:
  o improve README and DESCRIPTION
  o various cleanups of code and data

Changes in version 1.99.1 (2018-12-28)
+ fixes bioconductor CI warnings on missing links in deprecated functions

Changes in version 1.99.0 (2018-12-21)
+ major refactoring of codebase:
  o getData split into getProtein, getGenome, getOMAGroup
  o renamed getAnnotation -> annotateSequence
  o renamed getXref -> searchSequence
+ getProtein allows to retrieve many protein ids at once
+ improved documenation by a lot.

Changes in version 1.1.4 (2018-10-11)
+ format option (geneID2GO or GO2geneID) included in getInfo()
+ automatic loading and updating of object attributes which are given as URLs upon accession 

Changes in version 1.1.3 (2018-09-03)
+ Merging of the functions dealing with the members df into one master function getInfo()
+ Increased support for paginated responses
+ Increased support for larger responses
+ Extension of the getData() function (extra param 'detail')
+ Extension of the getGenomeAlignment() function (extra param 'rel_type')

Changes in version 1.1.2 (2018-09-03)
+ addition of the bulkRetrieve() function that handles POST requests

Changes in version 1.0.1 (2018-06-29)
+ Improved robustness of API calls

Changes in version 1.0.0 (2018-05-01)
+ Initial release in Bioconductor 3.7

Changes in version 0.99.9 (2017-10-14)
+ Initial release to Bioconductor development