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Update index.rst to add --trim_headers
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katholt authored Sep 4, 2024
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Expand Up @@ -35,7 +35,7 @@ For *K. pneumoniae* species complex, **Kleborate v3 can reproduce the outputs of

.. code-block:: Python
kleborate -a *.fasta -o kleborate_results -p kpsc
kleborate -a *.fasta -o kleborate_results -p kpsc --trim_headers
(Note the command has changed from Kleborate v2, the above is equivalent to running ``kleborate --all -o results.txt -a *.fasta`` with Kleborate v2 and includes all resistance and Kaptive-based typing)

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