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Merge pull request easybuilders#18303 from branfosj/20230713131912_ne…
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…w_pr_FreeSurfer732

use MCR dependency in FreeSurfer 7.3.2 and 7.4.0
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migueldiascosta authored Jul 13, 2023
2 parents 98b9afd + b4699b7 commit ac97208
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Expand Up @@ -10,21 +10,16 @@ longitudinal data."""

toolchain = SYSTEM

source_urls = [
'https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/',
'https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime?action=AttachFile&do=get&target='
]
sources = [
'%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz',
'runtime2014bLinux.tar.gz'
]
source_urls = ['https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/']
sources = ['%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz']
checksums = [
{'freesurfer-linux-centos7_x86_64-7.3.2.tar.gz':
'58518d3ee5abd2e05109208aed2eef145c4e3b994164df8c4e0033c1343b9e56'},
{'runtime2014bLinux.tar.gz': '944852af2b5a493f5261fd619af828c6e4afc0c90e6f7e709acfb616c5b51648'},
]

postinstallcmds = ['cp -a %(builddir)s/MCRv84/ %(installdir)s']
dependencies = [('MCR', 'R2019b.8')]

postinstallcmds = ["ln -s $EBROOTMCR/v97 %(installdir)s/MCRv97"]

license_text = """[email protected]
00000
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Original file line number Diff line number Diff line change
Expand Up @@ -10,21 +10,16 @@ longitudinal data."""

toolchain = SYSTEM

source_urls = [
'https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/',
'https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime?action=AttachFile&do=get&target='
]
sources = [
'%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz',
'runtime2014bLinux.tar.gz'
]
source_urls = ['https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/']
sources = ['%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz']
checksums = [
# freesurfer-linux-centos8_x86_64-7.3.2.tar.gz
'1448e64000b02a06aaad81548a4c8f92faf575f8320e67bdcd15a430ad10879b',
'944852af2b5a493f5261fd619af828c6e4afc0c90e6f7e709acfb616c5b51648', # runtime2014bLinux.tar.gz
]

postinstallcmds = ['cp -a %(builddir)s/MCRv84/ %(installdir)s']
dependencies = [('MCR', 'R2019b.8')]

postinstallcmds = ["ln -s $EBROOTMCR/v97 %(installdir)s/MCRv97"]

license_text = """[email protected]
00000
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Original file line number Diff line number Diff line change
Expand Up @@ -10,21 +10,16 @@ longitudinal data."""

toolchain = SYSTEM

source_urls = [
'https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/',
'https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime?action=AttachFile&do=get&target='
]
sources = [
'%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz',
'runtime2014bLinux.tar.gz'
]
source_urls = ['https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/']
sources = ['%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz']
checksums = [
{'freesurfer-linux-centos8_x86_64-7.4.0.tar.gz':
'a2eb8ca6d12c9133c4af90167d6b9fa532f7ace98cc0e1bc97c8a6135b53c237'},
{'runtime2014bLinux.tar.gz': '944852af2b5a493f5261fd619af828c6e4afc0c90e6f7e709acfb616c5b51648'},
]

postinstallcmds = ['cp -a %(builddir)s/MCRv84/ %(installdir)s']
dependencies = [('MCR', 'R2019b.8')]

postinstallcmds = ["ln -s $EBROOTMCR/v97 %(installdir)s/MCRv97"]

license_text = """[email protected]
00000
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Original file line number Diff line number Diff line change
Expand Up @@ -10,21 +10,16 @@ longitudinal data."""

toolchain = SYSTEM

source_urls = [
'https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/',
'https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime?action=AttachFile&do=get&target='
]
sources = [
'%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz',
'runtime2014bLinux.tar.gz'
]
source_urls = ['https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/']
sources = ['%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz']
checksums = [
{'freesurfer-linux-ubuntu20_amd64-7.4.0.tar.gz':
'2149e0d54220abf81b0caa5736b648b56f409b1e6578d921d0f7e4d62d586ca5'},
{'runtime2014bLinux.tar.gz': '944852af2b5a493f5261fd619af828c6e4afc0c90e6f7e709acfb616c5b51648'},
]

postinstallcmds = ['cp -a %(builddir)s/MCRv84/ %(installdir)s']
dependencies = [('MCR', 'R2019b.8')]

postinstallcmds = ["ln -s $EBROOTMCR/v97 %(installdir)s/MCRv97"]

license_text = """[email protected]
00000
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Original file line number Diff line number Diff line change
Expand Up @@ -10,21 +10,16 @@ longitudinal data."""

toolchain = SYSTEM

source_urls = [
'https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/',
'https://surfer.nmr.mgh.harvard.edu/fswiki/MatlabRuntime?action=AttachFile&do=get&target='
]
sources = [
'%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz',
'runtime2014bLinux.tar.gz'
]
source_urls = ['https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/%(version)s/']
sources = ['%(namelower)s-linux%(versionsuffix)s-%(version)s.tar.gz']
checksums = [
{'freesurfer-linux-ubuntu22_amd64-7.4.0.tar.gz':
'acd7f8b9a75cf41fab837caa95f2c9017079c15ca4446df2c47c88c321264f82'},
{'runtime2014bLinux.tar.gz': '944852af2b5a493f5261fd619af828c6e4afc0c90e6f7e709acfb616c5b51648'},
]

postinstallcmds = ['cp -a %(builddir)s/MCRv84/ %(installdir)s']
dependencies = [('MCR', 'R2019b.8')]

postinstallcmds = ["ln -s $EBROOTMCR/v97 %(installdir)s/MCRv97"]

license_text = """[email protected]
00000
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