minor edits

.Rhistory

@@ -174,3 +174,15 @@ shiny::runApp('inst/shiny')
 shiny::runApp('inst/shiny')
 shiny::runApp('inst/shiny')
 shiny::runApp('inst/shiny')
+remove.packages("MAVIS", lib="~/R/win-library/3.3")
+install.packages(c("shiny", "shinyAce", "shinyBS", "meta", "metafor", "metamisc", "MAd", "MAc", "quantreg", "ggplot2", "compute.es", "SCMA", "SCRT"))
+shiny::runApp('inst/shiny')
+install.packages("weightr")
+library("weightr", lib.loc="~/R/win-library/3.3")
+runApp('inst/shiny')
+runApp('inst/shiny')
+runApp('inst/shiny')
+runApp('inst/shiny')
+runApp('inst/shiny')
+runApp('inst/shiny')
+runApp('inst/shiny')

DESCRIPTION

@@ -2,11 +2,11 @@ Package: MAVIS
 Type: Package
 Title: Meta Analysis via Shiny
 Version: 1.1.2
-Date: 2016-04-26
-Authors@R: c(person("William Kyle", "Hamilton", role = c("aut", "cre"), email = "[email protected]"),
-             person("Atsushi", "Mizumoto", role = "aut"),
-             person("Burak", "Aydin", role = c("ctb", "trl")))
-Maintainer: William Kyle Hamilton <[email protected]>
+Date: 2016-06-21
+Authors@R: c(person("W. Kyle", "Hamilton", role = c("aut", "cre"), email = "[email protected]"),
+             person("Burak", "Aydin", role = "aut"),
+             person("Atsushi", "Mizumoto", role = "aut"))
+Maintainer: W. Kyle Hamilton <[email protected]>
 Description: Interactive shiny application for running a meta-analysis,
     provides support for both random effects and fixed effects models with the 'metafor' package.
     Additional support is included for calculating effect sizes plus

NEWS

@@ -1,8 +1,18 @@
+# CHANGES TO MAVIS 1.1.2 #
+
+## SIGNIFICANT USER-VISIBILE CHANGES ##
+
+* Examples now include data from published papers
+* More effect size calculators have been added
+
+## MINOR CHANGES ##
+* Added the framework to include the weightr package
+
 # CHANGES TO MAVIS 1.1.1 #
 
 ## SIGNIFICANT USER-VISIBILE CHANGES ##
 
-* Turkish version of MAVIS (aRma) is now added to the package and can be started using startaRma 
+* Turkish version of MAVIS (aRma) is now added to the package and can be started using startaRma
 
 # CHANGES TO MAVIS 1.1 #
 
@@ -21,4 +31,3 @@
 ## MINOR CHANGES ##
 * Information provide about GPLv3.
 *	References for methods added throughout interface.
-

README.md

@@ -1,18 +1,21 @@
-MAVIS: Meta Analysis via Shiny v1.1.1 "Smiling Fox"
+MAVIS: Meta Analysis via Shiny v1.1.2 "Smiling Fox"
 =====
 [![CRAN Version](http://www.r-pkg.org/badges/version/MAVIS)](http://cran.rstudio.com/web/packages/MAVIS)
 [![Monthly Downloads](http://cranlogs.r-pkg.org/badges/MAVIS)](http://cranlogs.r-pkg.org/badges/MAVIS)
 [![Total Downloads](http://cranlogs.r-pkg.org/badges/grand-total/MAVIS)](http://cranlogs.r-pkg.org/badges/grand-total/MAVIS)
 
-### Live demo of MAVIS v1.1.1 can be found here http://kylehamilton.net/shiny/MAVIS/
+### Live demo of MAVIS v1.1.2 can be found here http://kylehamilton.net/shiny/MAVIS/
 
-#### News about MAVIS
+
+June 21, 2016
+* Examples now include data from published papers
+* More effect size calculators have been added
 
 August 4, 2015
 * Version 1.1.1 has been sent to CRAN
 * Added one new effect size calculator and included the Turkish version of MAVIS (aRma) to the package.
 
-* April 29, 2015
+April 29, 2015
 * Version 1.1 has been sent to CRAN and can be found here http://cran.r-project.org/web/packages/MAVIS/index.html.
 
 
@@ -42,17 +45,17 @@ Image Licensed under https://creativecommons.org/licenses/by/2.0/
 ### Acknowledgments and Authors
 
 #### Acknowledgments
-William Kyle Hamilton would like to thank the [Health Communications and Interventions Lab at UC Merced](http://cameronhcilab.com/) for their comments and beta testing efforts on this application as well as [Kathleen Coburn](http://psychology.ucmerced.edu/content/kathleen-coburn) for her feedback and evaluation of the statistical methods related to this project.
+W. Kyle Hamilton would like to thank the [Health Communications and Interventions Lab at UC Merced](http://cameronhcilab.com/) for their comments and beta testing efforts on this application as well as [Kathleen Coburn](http://psychology.ucmerced.edu/content/kathleen-coburn) for her feedback and evaluation of the statistical methods related to this project.
 
 Atsushi Mizumoto would like to thank [Dr. Luke Plonsky](http://oak.ucc.nau.edu/ldp3/) and [Dr. Yo In'nami](https://sites.google.com/site/yoinnami/) for their support and feedback to create this web application.
 
 
 #### Authors
 
 
-![alt text](http://kylehamilton.com/wp-content/uploads/2014/11/kyle80.jpg "Logo Title Text 1") [William Kyle Hamilton - University of California, Merced](http://www.kylehamilton.com)
+![alt text](http://kylehamilton.com/wp-content/uploads/2014/11/kyle80.jpg "Logo Title Text 1") [W. Kyle Hamilton - University of California, Merced](http://www.kylehamilton.com)
 
-William Kyle Hamilton maintains this application and has authored new features.
+W. Kyle Hamilton maintains this application and has authored new features.
 
 ![alt text](http://oi59.tinypic.com/2mnrcci.jpg "Logo Title Text 1") [Burak Aydin, PhD - Recep Tayyip Erdoğan University](http://akademisyen.erdogan.edu.tr/akademisyen.php?uyeid=827a0e170c32e5ce6e7b31ebda784148)
 

inst/CITATION

@@ -4,12 +4,12 @@ citHeader("To cite package 'MAVIS' in publications use: ")
 
  citEntry(entry="Manual",
   	  title = "MAVIS: Meta Analysis via Shiny",
-		  author = "William Kyle Hamilton and Atsushi Mizumoto",
-		  year = 2015,
+		  author = "W. Kyle Hamilton, Burak Aydin, Atsushi Mizumoto",
+		  year = 2016,
 		  note = vers,
 		  textVersion =
-		  paste("William Kyle Hamilton and Atsushi Mizumoto (",
-				2015,
+		  paste("W. Kyle Hamilton, Burak Aydin, and Atsushi Mizumoto (",
+				2016,
 				"). MAVIS: Meta Analysis via Shiny. ",
 				vers, ".", sep=""),
       url = {"http://CRAN.R-project.org/package=MAVIS"})

inst/shiny/ui.R

@@ -12,7 +12,7 @@ library("compute.es")
 library("SCMA")
 library("SCRT")
 library("weightr")
-shinyUI(navbarPage(title=div(img(src="http://kylehamilton.com/wp-content/uploads/2015/04/mavis1a-e1430059956805.png")), windowTitle="MAVIS v1.1.1",
+shinyUI(navbarPage(title=div(img(src="http://kylehamilton.com/wp-content/uploads/2015/04/mavis1a-e1430059956805.png")), windowTitle="MAVIS v1.1.2",
 #shinyUI(navbarPage("MAVIS: Meta Analysis Via Shiny v1.0.4", windowTitle="MAVIS v1.0.4",
 # If I want to add a theme here is how to do it
 # shinyUI(navbarPage(theme = shinytheme("flatly"),"MAVIS: Meta Analysis Via Shiny v1.0.3",
@@ -874,8 +874,8 @@ p("MAVIS was designed from the beginning to help users run a meta-analysis as ef
   MAVIS a positive user experience with an easy to use interface along with the power of R to provide 
   the best possible user experience."),
 br(),
-strong("MAVIS Version 1.1.1"),
-p("Last Updated July 20th 2015"),
+strong("MAVIS Version 1.1.2"),
+p("Last Updated June 21th 2016"),
 p("Number of monthly downloads from CRAN"),
 img(src = "http://cranlogs.r-pkg.org/badges/MAVIS", seamless=NA),
 
@@ -887,7 +887,7 @@ br()
 
 strong('Acknowledgments'),
 
-p('William Kyle Hamilton would like to thank the ',
+p('W. Kyle Hamilton would like to thank the ',
   a("Health Communications and Interventions Lab at the University of California, Merced", href="http://cameronhcilab.com/", target="_blank"),
   'for their comments and beta testing efforts on this application ', 'as well as',
   a("Kathleen Coburn", href="http://psychology.ucmerced.edu/content/kathleen-coburn", target="_blank"),
@@ -903,8 +903,8 @@ br(),
 strong('Authors'),
 
 HTML('<div style="clear: left;"><img src="http://kylehamilton.com/wp-content/uploads/2014/11/kyle80.jpg" alt="" style="float: left; margin-right:5px" /></div>'),
-p(a("William Kyle Hamilton - University of California, Merced", href="http://www.kylehamilton.com", target="_blank")),
-p("William Kyle Hamilton maintains this application and has authored new features."),
+p(a("W. Kyle Hamilton - University of California, Merced", href="http://www.kylehamilton.com", target="_blank")),
+p("W. Kyle Hamilton maintains this application and has authored new features."),
 br(),
 HTML('<div style="clear: left;"><img src="http://oi59.tinypic.com/2mnrcci.jpg" alt="" style="float: left; margin-right:5px" /></div>'),
 p(a("Burak Aydin, PhD - RTE University", href="http://www.aydinburak.net/", target="_blank"),br(),
@@ -954,7 +954,7 @@ br()
 strong('License'),
 
 p("MAVIS: Meta Analysis via Shiny"),
-p(" Copyright 2015  William Kyle Hamilton and Atsushi Mizumoto"),
+p(" Copyright 2016  W. Kyle Hamilton, Burak Aydin, and Atsushi Mizumoto"),
 
 p(" This program is free software you can redistribute it and or modify
   it under the terms of the GNU General Public License as published by