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CAESAR 1.0.0
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@thomas-bailly thomas-bailly released this 19 Sep 12:40
· 7 commits to main since this release
1.0.0
5b0400c

Features

  • Sequence search with Blastp (using Diamond) or Hmmsearch
  • Filters the sequences retrieved
  • Clustering of filtered sequences with Diamond
  • Selection of n candidates for each group based on collections of organisms (user provided and private)
  • Builds a phylogenetic tree with Mafft and FastTree
Assets 2
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