add testing dataset (C. trachomatis)

labgem · Jul 3, 2018 · 39b30b1 · 39b30b1
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diff --git a/testing_dataset_C_trachomatis/gene_families.tsv b/testing_dataset_C_trachomatis/gene_families.tsv
diff --git a/testing_dataset_C_trachomatis/gff_files/2923%GCF_000174055.1_ASM17405v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/2923%GCF_000174055.1_ASM17405v1_genomic.gff
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diff --git a/testing_dataset_C_trachomatis/gff_files/C_TW-3%GCF_000507225.1_ASM50722v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/C_TW-3%GCF_000507225.1_ASM50722v1_genomic.gff
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diff --git a/testing_dataset_C_trachomatis/gff_files/D_13-96%GCF_000590675.1_ASM59067v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/D_13-96%GCF_000590675.1_ASM59067v1_genomic.gff
diff --git a/testing_dataset_C_trachomatis/gff_files/D_14-96%GCF_000590695.1_ASM59069v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/D_14-96%GCF_000590695.1_ASM59069v1_genomic.gff
diff --git a/testing_dataset_C_trachomatis/gff_files/D_CS637_11%GCF_001183765.1_ASM118376v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/D_CS637_11%GCF_001183765.1_ASM118376v1_genomic.gff
diff --git a/testing_dataset_C_trachomatis/gff_files/D_SotonD1%GCF_000318585.1_ASM31858v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/D_SotonD1%GCF_000318585.1_ASM31858v1_genomic.gff
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diff --git a/testing_dataset_C_trachomatis/gff_files/E_11023%GCF_000092745.1_ASM9274v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/E_11023%GCF_000092745.1_ASM9274v1_genomic.gff
diff --git a/testing_dataset_C_trachomatis/gff_files/E_12-94%GCF_000590655.1_ASM59065v1_genomic.gff b/testing_dataset_C_trachomatis/gff_files/E_12-94%GCF_000590655.1_ASM59065v1_genomic.gff
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diff --git a/testing_dataset_C_trachomatis/gff_files/E_SW3%GCF_000304495.1_Cm_ESW3_genomic.gff b/testing_dataset_C_trachomatis/gff_files/E_SW3%GCF_000304495.1_Cm_ESW3_genomic.gff
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diff --git a/...D1%GCF_000318585.1_ASM31858v1_genomic/D_SotonD1%GCF_000318585.1_ASM31858v1_genomic.gff.gz b/...D1%GCF_000318585.1_ASM31858v1_genomic/D_SotonD1%GCF_000318585.1_ASM31858v1_genomic.gff.gz
diff --git a/...D5%GCF_000318605.1_ASM31860v1_genomic/D_SotonD5%GCF_000318605.1_ASM31860v1_genomic.gff.gz b/...D5%GCF_000318605.1_ASM31860v1_genomic/D_SotonD5%GCF_000318605.1_ASM31860v1_genomic.gff.gz
diff --git a/...D6%GCF_000318625.1_ASM31862v1_genomic/D_SotonD6%GCF_000318625.1_ASM31862v1_genomic.gff.gz b/...D6%GCF_000318625.1_ASM31862v1_genomic/D_SotonD6%GCF_000318625.1_ASM31862v1_genomic.gff.gz
diff --git a/...W-3_CX%GCF_000008725.1_ASM872v1_genomic/D_UW-3_CX%GCF_000008725.1_ASM872v1_genomic.gff.gz b/...W-3_CX%GCF_000008725.1_ASM872v1_genomic/D_UW-3_CX%GCF_000008725.1_ASM872v1_genomic.gff.gz
diff --git a/...-103%GCF_001655335.1_ASM165533v1_genomic/E-103%GCF_001655335.1_ASM165533v1_genomic.gff.gz b/...-103%GCF_001655335.1_ASM165533v1_genomic/E-103%GCF_001655335.1_ASM165533v1_genomic.gff.gz
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diff --git a/...31%GCF_001655495.1_ASM165549v1_genomic/E-32931%GCF_001655495.1_ASM165549v1_genomic.gff.gz b/...31%GCF_001655495.1_ASM165549v1_genomic/E-32931%GCF_001655495.1_ASM165549v1_genomic.gff.gz
diff --git a/...-547%GCF_001655415.1_ASM165541v1_genomic/E-547%GCF_001655415.1_ASM165541v1_genomic.gff.gz b/...-547%GCF_001655415.1_ASM165541v1_genomic/E-547%GCF_001655415.1_ASM165541v1_genomic.gff.gz
diff --git a/...873%GCF_001655455.1_ASM165545v1_genomic/E-8873%GCF_001655455.1_ASM165545v1_genomic.gff.gz b/...873%GCF_001655455.1_ASM165545v1_genomic/E-8873%GCF_001655455.1_ASM165545v1_genomic.gff.gz
diff --git a/...20%GCF_001655535.1_ASM165553v1_genomic/E-DK-20%GCF_001655535.1_ASM165553v1_genomic.gff.gz b/...20%GCF_001655535.1_ASM165553v1_genomic/E-DK-20%GCF_001655535.1_ASM165553v1_genomic.gff.gz
diff --git a/..._11023%GCF_000092745.1_ASM9274v1_genomic/E_11023%GCF_000092745.1_ASM9274v1_genomic.gff.gz b/..._11023%GCF_000092745.1_ASM9274v1_genomic/E_11023%GCF_000092745.1_ASM9274v1_genomic.gff.gz
diff --git a/...2-94%GCF_000590655.1_ASM59065v1_genomic/E_12-94%GCF_000590655.1_ASM59065v1_genomic.gff.gz b/...2-94%GCF_000590655.1_ASM59065v1_genomic/E_12-94%GCF_000590655.1_ASM59065v1_genomic.gff.gz
diff --git a/...ts/E_150%GCF_000092665.1_ASM9266v1_genomic/E_150%GCF_000092665.1_ASM9266v1_genomic.gff.gz b/...ts/E_150%GCF_000092665.1_ASM9266v1_genomic/E_150%GCF_000092665.1_ASM9266v1_genomic.gff.gz
diff --git a/..._Bour%GCF_000318645.1_ASM31864v1_genomic/E_Bour%GCF_000318645.1_ASM31864v1_genomic.gff.gz b/..._Bour%GCF_000318645.1_ASM31864v1_genomic/E_Bour%GCF_000318645.1_ASM31864v1_genomic.gff.gz
diff --git a/..._C599%GCF_000969785.1_ASM96978v1_genomic/E_C599%GCF_000969785.1_ASM96978v1_genomic.gff.gz b/..._C599%GCF_000969785.1_ASM96978v1_genomic/E_C599%GCF_000969785.1_ASM96978v1_genomic.gff.gz
diff --git a/...CF_001183805.1_ASM118380v1_genomic/E_CS1025_11%GCF_001183805.1_ASM118380v1_genomic.gff.gz b/...CF_001183805.1_ASM118380v1_genomic/E_CS1025_11%GCF_001183805.1_ASM118380v1_genomic.gff.gz
diff --git a/...8(f)%GCF_000472205.1_E_CS88_f__genomic/E_CS88(f)%GCF_000472205.1_E_CS88_f__genomic.gff.gz b/...8(f)%GCF_000472205.1_E_CS88_f__genomic/E_CS88(f)%GCF_000472205.1_E_CS88_f__genomic.gff.gz
diff --git a/...8(i)%GCF_000472225.1_E_CS88_i__genomic/E_CS88(i)%GCF_000472225.1_E_CS88_i__genomic.gff.gz b/...8(i)%GCF_000472225.1_E_CS88_i__genomic/E_CS88(i)%GCF_000472225.1_E_CS88_i__genomic.gff.gz
diff --git a/...esults/E_SW3%GCF_000304495.1_Cm_ESW3_genomic/E_SW3%GCF_000304495.1_Cm_ESW3_genomic.gff.gz b/...esults/E_SW3%GCF_000304495.1_Cm_ESW3_genomic/E_SW3%GCF_000304495.1_Cm_ESW3_genomic.gff.gz
diff --git a/...E4%GCF_000318665.1_ASM31866v1_genomic/E_SotonE4%GCF_000318665.1_ASM31866v1_genomic.gff.gz b/...E4%GCF_000318665.1_ASM31866v1_genomic/E_SotonE4%GCF_000318665.1_ASM31866v1_genomic.gff.gz
diff --git a/...E8%GCF_000318685.1_ASM31868v1_genomic/E_SotonE8%GCF_000318685.1_ASM31868v1_genomic.gff.gz b/...E8%GCF_000318685.1_ASM31868v1_genomic/E_SotonE8%GCF_000318685.1_ASM31868v1_genomic.gff.gz
diff --git a/...068%GCF_001655575.1_ASM165557v1_genomic/F-6068%GCF_001655575.1_ASM165557v1_genomic.gff.gz b/...068%GCF_001655575.1_ASM165557v1_genomic/F-6068%GCF_001655575.1_ASM165557v1_genomic.gff.gz
diff --git a/..._1-93%GCF_000590575.1_ASM59057v1_genomic/F_1-93%GCF_000590575.1_ASM59057v1_genomic.gff.gz b/..._1-93%GCF_000590575.1_ASM59057v1_genomic/F_1-93%GCF_000590575.1_ASM59057v1_genomic.gff.gz
diff --git a/...1-96%GCF_000590635.1_ASM59063v1_genomic/F_11-96%GCF_000590635.1_ASM59063v1_genomic.gff.gz b/...1-96%GCF_000590635.1_ASM59063v1_genomic/F_11-96%GCF_000590635.1_ASM59063v1_genomic.gff.gz
diff --git a/..._2-93%GCF_000590595.1_ASM59059v1_genomic/F_2-93%GCF_000590595.1_ASM59059v1_genomic.gff.gz b/..._2-93%GCF_000590595.1_ASM59059v1_genomic/F_2-93%GCF_000590595.1_ASM59059v1_genomic.gff.gz
diff --git a/..._6-94%GCF_000590615.1_ASM59061v1_genomic/F_6-94%GCF_000590615.1_ASM59061v1_genomic.gff.gz b/..._6-94%GCF_000590615.1_ASM59061v1_genomic/F_6-94%GCF_000590615.1_ASM59061v1_genomic.gff.gz
diff --git a/...GCF_001183825.1_ASM118382v1_genomic/F_CS847_08%GCF_001183825.1_ASM118382v1_genomic.gff.gz b/...GCF_001183825.1_ASM118382v1_genomic/F_CS847_08%GCF_001183825.1_ASM118382v1_genomic.gff.gz
diff --git a/...esults/F_SW4%GCF_000304515.1_Cm_FSW4_genomic/F_SW4%GCF_000304515.1_Cm_FSW4_genomic.gff.gz b/...esults/F_SW4%GCF_000304515.1_Cm_FSW4_genomic/F_SW4%GCF_000304515.1_Cm_FSW4_genomic.gff.gz
diff --git a/...esults/F_SW5%GCF_000304535.1_Cm_FSW5_genomic/F_SW5%GCF_000304535.1_Cm_FSW5_genomic.gff.gz b/...esults/F_SW5%GCF_000304535.1_Cm_FSW5_genomic/F_SW5%GCF_000304535.1_Cm_FSW5_genomic.gff.gz
diff --git a/...%GCF_000969805.1_ASM96980v1_genomic/F_SWFPminus%GCF_000969805.1_ASM96980v1_genomic.gff.gz b/...%GCF_000969805.1_ASM96980v1_genomic/F_SWFPminus%GCF_000969805.1_ASM96980v1_genomic.gff.gz
diff --git a/...F3%GCF_000318705.1_ASM31870v1_genomic/F_SotonF3%GCF_000318705.1_ASM31870v1_genomic.gff.gz b/...F3%GCF_000318705.1_ASM31870v1_genomic/F_SotonF3%GCF_000318705.1_ASM31870v1_genomic.gff.gz
diff --git a/..._11074%GCF_000092725.1_ASM9272v1_genomic/G_11074%GCF_000092725.1_ASM9272v1_genomic.gff.gz b/..._11074%GCF_000092725.1_ASM9272v1_genomic/G_11074%GCF_000092725.1_ASM9272v1_genomic.gff.gz
diff --git a/..._11222%GCF_000092705.1_ASM9270v1_genomic/G_11222%GCF_000092705.1_ASM9270v1_genomic.gff.gz b/..._11222%GCF_000092705.1_ASM9270v1_genomic/G_11222%GCF_000092705.1_ASM9270v1_genomic.gff.gz
diff --git a/.../G_9301%GCF_000092805.1_ASM9280v1_genomic/G_9301%GCF_000092805.1_ASM9280v1_genomic.gff.gz b/.../G_9301%GCF_000092805.1_ASM9280v1_genomic/G_9301%GCF_000092805.1_ASM9280v1_genomic.gff.gz
diff --git a/.../G_9768%GCF_000092685.1_ASM9268v1_genomic/G_9768%GCF_000092685.1_ASM9268v1_genomic.gff.gz b/.../G_9768%GCF_000092685.1_ASM9268v1_genomic/G_9768%GCF_000092685.1_ASM9268v1_genomic.gff.gz
diff --git a/...G1%GCF_000318745.1_ASM31874v1_genomic/G_SotonG1%GCF_000318745.1_ASM31874v1_genomic.gff.gz b/...G1%GCF_000318745.1_ASM31874v1_genomic/G_SotonG1%GCF_000318745.1_ASM31874v1_genomic.gff.gz
diff --git a/.../IU824%GCF_000348845.1_ASM34884v1_genomic/IU824%GCF_000348845.1_ASM34884v1_genomic.gff.gz b/.../IU824%GCF_000348845.1_ASM34884v1_genomic/IU824%GCF_000348845.1_ASM34884v1_genomic.gff.gz
diff --git a/.../IU888%GCF_000348825.1_ASM34882v1_genomic/IU888%GCF_000348825.1_ASM34882v1_genomic.gff.gz b/.../IU888%GCF_000348825.1_ASM34882v1_genomic/IU888%GCF_000348825.1_ASM34882v1_genomic.gff.gz
diff --git a/...0-97%GCF_000590715.1_ASM59071v1_genomic/Ia20-97%GCF_000590715.1_ASM59071v1_genomic.gff.gz b/...0-97%GCF_000590715.1_ASM59071v1_genomic/Ia20-97%GCF_000590715.1_ASM59071v1_genomic.gff.gz
diff --git a/...CF_001183845.1_ASM118384v1_genomic/Ia_CS190_96%GCF_001183845.1_ASM118384v1_genomic.gff.gz b/...CF_001183845.1_ASM118384v1_genomic/Ia_CS190_96%GCF_001183845.1_ASM118384v1_genomic.gff.gz
diff --git a/...%GCF_000318765.1_ASM31876v1_genomic/Ia_SotonIa1%GCF_000318765.1_ASM31876v1_genomic.gff.gz b/...%GCF_000318765.1_ASM31876v1_genomic/Ia_SotonIa1%GCF_000318765.1_ASM31876v1_genomic.gff.gz
diff --git a/...%GCF_000318785.1_ASM31878v1_genomic/Ia_SotonIa3%GCF_000318785.1_ASM31878v1_genomic.gff.gz b/...%GCF_000318785.1_ASM31878v1_genomic/Ia_SotonIa3%GCF_000318785.1_ASM31878v1_genomic.gff.gz
diff --git a/...7-97%GCF_000590735.1_ASM59073v1_genomic/J_27-97%GCF_000590735.1_ASM59073v1_genomic.gff.gz b/...7-97%GCF_000590735.1_ASM59073v1_genomic/J_27-97%GCF_000590735.1_ASM59073v1_genomic.gff.gz
diff --git a/...1-98%GCF_000590755.1_ASM59075v1_genomic/J_31-98%GCF_000590755.1_ASM59075v1_genomic.gff.gz b/...1-98%GCF_000590755.1_ASM59075v1_genomic/J_31-98%GCF_000590755.1_ASM59075v1_genomic.gff.gz
diff --git a/...1%GCF_000441775.1_ASM44177v1_genomic/J_6276tet1%GCF_000441775.1_ASM44177v1_genomic.gff.gz b/...1%GCF_000441775.1_ASM44177v1_genomic/J_6276tet1%GCF_000441775.1_ASM44177v1_genomic.gff.gz
diff --git a/.../Jali20%GCF_000026925.1_ASM2692v1_genomic/Jali20%GCF_000026925.1_ASM2692v1_genomic.gff.gz b/.../Jali20%GCF_000026925.1_ASM2692v1_genomic/Jali20%GCF_000026925.1_ASM2692v1_genomic.gff.gz
diff --git a/...K1%GCF_000318805.1_ASM31880v1_genomic/K_SotonK1%GCF_000318805.1_ASM31880v1_genomic.gff.gz b/...K1%GCF_000318805.1_ASM31880v1_genomic/K_SotonK1%GCF_000318805.1_ASM31880v1_genomic.gff.gz
diff --git a/...1_115%GCF_000318845.1_ASM31884v1_genomic/L1_115%GCF_000318845.1_ASM31884v1_genomic.gff.gz b/...1_115%GCF_000318845.1_ASM31884v1_genomic/L1_115%GCF_000318845.1_ASM31884v1_genomic.gff.gz
diff --git a/...1_224%GCF_000318865.1_ASM31886v1_genomic/L1_224%GCF_000318865.1_ASM31886v1_genomic.gff.gz b/...1_224%GCF_000318865.1_ASM31886v1_genomic/L1_224%GCF_000318865.1_ASM31886v1_genomic.gff.gz
diff --git a/...LN%GCF_000318825.1_ASM31882v1_genomic/L1_440_LN%GCF_000318825.1_ASM31882v1_genomic.gff.gz b/...LN%GCF_000318825.1_ASM31882v1_genomic/L1_440_LN%GCF_000318825.1_ASM31882v1_genomic.gff.gz
diff --git a/...7R%GCF_000318885.1_ASM31888v1_genomic/L2_25667R%GCF_000318885.1_ASM31888v1_genomic.gff.gz b/...7R%GCF_000318885.1_ASM31888v1_genomic/L2_25667R%GCF_000318885.1_ASM31888v1_genomic.gff.gz
diff --git a/...GCF_000364785.1_ASM36478v1_genomic/L2_434_Bu(f)%GCF_000364785.1_ASM36478v1_genomic.gff.gz b/...GCF_000364785.1_ASM36478v1_genomic/L2_434_Bu(f)%GCF_000364785.1_ASM36478v1_genomic.gff.gz
diff --git a/...GCF_000364765.1_ASM36476v1_genomic/L2_434_Bu(i)%GCF_000364765.1_ASM36476v1_genomic.gff.gz b/...GCF_000364765.1_ASM36476v1_genomic/L2_434_Bu(i)%GCF_000364765.1_ASM36476v1_genomic.gff.gz
diff --git a/..._795%GCF_000318985.1_ASM31898v1_genomic/L2b_795%GCF_000318985.1_ASM31898v1_genomic.gff.gz b/..._795%GCF_000318985.1_ASM31898v1_genomic/L2b_795%GCF_000318985.1_ASM31898v1_genomic.gff.gz
diff --git a/...%GCF_000318905.1_ASM31890v1_genomic/L2b_8200_07%GCF_000318905.1_ASM31890v1_genomic.gff.gz b/...%GCF_000318905.1_ASM31890v1_genomic/L2b_8200_07%GCF_000318905.1_ASM31890v1_genomic.gff.gz
diff --git a/...ms1%GCF_000319005.1_ASM31900v1_genomic/L2b_Ams1%GCF_000319005.1_ASM31900v1_genomic.gff.gz b/...ms1%GCF_000319005.1_ASM31900v1_genomic/L2b_Ams1%GCF_000319005.1_ASM31900v1_genomic.gff.gz
diff --git a/...ms2%GCF_000319025.1_ASM31902v1_genomic/L2b_Ams2%GCF_000319025.1_ASM31902v1_genomic.gff.gz b/...ms2%GCF_000319025.1_ASM31902v1_genomic/L2b_Ams2%GCF_000319025.1_ASM31902v1_genomic.gff.gz
diff --git a/...ms3%GCF_000319045.1_ASM31904v1_genomic/L2b_Ams3%GCF_000319045.1_ASM31904v1_genomic.gff.gz b/...ms3%GCF_000319045.1_ASM31904v1_genomic/L2b_Ams3%GCF_000319045.1_ASM31904v1_genomic.gff.gz
diff --git a/...ms4%GCF_000319065.1_ASM31906v1_genomic/L2b_Ams4%GCF_000319065.1_ASM31906v1_genomic.gff.gz b/...ms4%GCF_000319065.1_ASM31906v1_genomic/L2b_Ams4%GCF_000319065.1_ASM31906v1_genomic.gff.gz
diff --git a/...ms5%GCF_000319085.1_ASM31908v1_genomic/L2b_Ams5%GCF_000319085.1_ASM31908v1_genomic.gff.gz b/...ms5%GCF_000319085.1_ASM31908v1_genomic/L2b_Ams5%GCF_000319085.1_ASM31908v1_genomic.gff.gz
diff --git a/...%GCF_000971705.1_ASM97170v1_genomic/L2b_CS19_08%GCF_000971705.1_ASM97170v1_genomic.gff.gz b/...%GCF_000971705.1_ASM97170v1_genomic/L2b_CS19_08%GCF_000971705.1_ASM97170v1_genomic.gff.gz
diff --git a/...GCF_000971725.1_ASM97172v1_genomic/L2b_CS784_08%GCF_000971725.1_ASM97172v1_genomic.gff.gz b/...GCF_000971725.1_ASM97172v1_genomic/L2b_CS784_08%GCF_000971725.1_ASM97172v1_genomic.gff.gz
diff --git a/...04%GCF_000318965.1_ASM31896v1_genomic/L2b_CV204%GCF_000318965.1_ASM31896v1_genomic.gff.gz b/...04%GCF_000318965.1_ASM31896v1_genomic/L2b_CV204%GCF_000318965.1_ASM31896v1_genomic.gff.gz
diff --git a/...%GCF_000319125.1_ASM31912v1_genomic/L2b_Canada1%GCF_000319125.1_ASM31912v1_genomic.gff.gz b/...%GCF_000319125.1_ASM31912v1_genomic/L2b_Canada1%GCF_000319125.1_ASM31912v1_genomic.gff.gz
diff --git a/..._LST%GCF_000318945.1_ASM31894v1_genomic/L2b_LST%GCF_000318945.1_ASM31894v1_genomic.gff.gz b/..._LST%GCF_000318945.1_ASM31894v1_genomic/L2b_LST%GCF_000318945.1_ASM31894v1_genomic.gff.gz
diff --git a/...-2%GCF_000318925.1_ASM31892v1_genomic/L2b_UCH-2%GCF_000318925.1_ASM31892v1_genomic.gff.gz b/...-2%GCF_000318925.1_ASM31892v1_genomic/L2b_UCH-2%GCF_000318925.1_ASM31892v1_genomic.gff.gz
diff --git a/...ults/L2c%GCF_000220105.1_ASM22010v1_genomic/L2c%GCF_000220105.1_ASM22010v1_genomic.gff.gz b/...ults/L2c%GCF_000220105.1_ASM22010v1_genomic/L2c%GCF_000220105.1_ASM22010v1_genomic.gff.gz
diff --git a/...2tet1%GCF_000175515.1_ASM17551v1_genomic/L2tet1%GCF_000175515.1_ASM17551v1_genomic.gff.gz b/...2tet1%GCF_000175515.1_ASM17551v1_genomic/L2tet1%GCF_000175515.1_ASM17551v1_genomic.gff.gz
diff --git a/...LN%GCF_000319105.1_ASM31910v1_genomic/L3_404_LN%GCF_000319105.1_ASM31910v1_genomic.gff.gz b/...LN%GCF_000319105.1_ASM31910v1_genomic/L3_404_LN%GCF_000319105.1_ASM31910v1_genomic.gff.gz
diff --git a/...GV1339%GCF_001317705.1_7054_3_88_genomic/LGV1339%GCF_001317705.1_7054_3_88_genomic.gff.gz b/...GV1339%GCF_001317705.1_7054_3_88_genomic/LGV1339%GCF_001317705.1_7054_3_88_genomic.gff.gz
diff --git a/.../LGV913%GCF_001317745.1_7054_3_87_genomic/LGV913%GCF_001317745.1_7054_3_87_genomic.gff.gz b/.../LGV913%GCF_001317745.1_7054_3_87_genomic/LGV913%GCF_001317745.1_7054_3_87_genomic.gff.gz
diff --git a/...11L%GCF_001885175.1_ASM188517v1_genomic/QH111L%GCF_001885175.1_ASM188517v1_genomic.gff.gz b/...11L%GCF_001885175.1_ASM188517v1_genomic/QH111L%GCF_001885175.1_ASM188517v1_genomic.gff.gz
diff --git a/...3IMS%GCF_001317845.1_7396_3_10_genomic/R26833IMS%GCF_001317845.1_7396_3_10_genomic.gff.gz b/...3IMS%GCF_001317845.1_7396_3_10_genomic/R26833IMS%GCF_001317845.1_7396_3_10_genomic.gff.gz
diff --git a/...%GCF_001398155.1_7501_6_49_genomic/R26833extract%GCF_001398155.1_7501_6_49_genomic.gff.gz b/...%GCF_001398155.1_7501_6_49_genomic/R26833extract%GCF_001398155.1_7501_6_49_genomic.gff.gz
diff --git a/...1IMS%GCF_001317805.1_7396_3_14_genomic/R27091IMS%GCF_001317805.1_7396_3_14_genomic.gff.gz b/...1IMS%GCF_001317805.1_7396_3_14_genomic/R27091IMS%GCF_001317805.1_7396_3_14_genomic.gff.gz
diff --git a/...%GCF_001398135.1_7501_6_52_genomic/R27091extract%GCF_001398135.1_7501_6_52_genomic.gff.gz b/...%GCF_001398135.1_7501_6_52_genomic/R27091extract%GCF_001398135.1_7501_6_52_genomic.gff.gz
diff --git a/...7IMS%GCF_001317785.1_7396_3_13_genomic/R28017IMS%GCF_001317785.1_7396_3_13_genomic.gff.gz b/...7IMS%GCF_001317785.1_7396_3_13_genomic/R28017IMS%GCF_001317785.1_7396_3_13_genomic.gff.gz
diff --git a/...%GCF_001398175.1_7501_6_51_genomic/R28017extract%GCF_001398175.1_7501_6_51_genomic.gff.gz b/...%GCF_001398175.1_7501_6_51_genomic/R28017extract%GCF_001398175.1_7501_6_51_genomic.gff.gz
diff --git a/...0IMS%GCF_001317825.1_7396_3_11_genomic/R32100IMS%GCF_001317825.1_7396_3_11_genomic.gff.gz b/...0IMS%GCF_001317825.1_7396_3_11_genomic/R32100IMS%GCF_001317825.1_7396_3_11_genomic.gff.gz
diff --git a/...%GCF_001398215.1_7501_6_50_genomic/R32100extract%GCF_001398215.1_7501_6_50_genomic.gff.gz b/...%GCF_001398215.1_7501_6_50_genomic/R32100extract%GCF_001398215.1_7501_6_50_genomic.gff.gz
diff --git a/...%GCF_001398275.1_7501_6_61_genomic/R33512extract%GCF_001398275.1_7501_6_61_genomic.gff.gz b/...%GCF_001398275.1_7501_6_61_genomic/R33512extract%GCF_001398275.1_7501_6_61_genomic.gff.gz
diff --git a/...75IMS%GCF_001398295.1_7396_3_21_genomic/R4175IMS%GCF_001398295.1_7396_3_21_genomic.gff.gz b/...75IMS%GCF_001398295.1_7396_3_21_genomic/R4175IMS%GCF_001398295.1_7396_3_21_genomic.gff.gz
diff --git a/...t%GCF_001398255.1_7501_6_62_genomic/R4175extract%GCF_001398255.1_7501_6_62_genomic.gff.gz b/...t%GCF_001398255.1_7501_6_62_genomic/R4175extract%GCF_001398255.1_7501_6_62_genomic.gff.gz
diff --git a/...%GCF_000441715.1_ASM44171v1_genomic/RC-F(s)_342%GCF_000441715.1_ASM44171v1_genomic.gff.gz b/...%GCF_000441715.1_ASM44171v1_genomic/RC-F(s)_342%GCF_000441715.1_ASM44171v1_genomic.gff.gz
diff --git a/...%GCF_000441635.1_ASM44163v1_genomic/RC-F(s)_852%GCF_000441635.1_ASM44163v1_genomic.gff.gz b/...%GCF_000441635.1_ASM44163v1_genomic/RC-F(s)_852%GCF_000441635.1_ASM44163v1_genomic.gff.gz
diff --git a/...F_69%GCF_000441585.1_ASM44158v1_genomic/RC-F_69%GCF_000441585.1_ASM44158v1_genomic.gff.gz b/...F_69%GCF_000441585.1_ASM44158v1_genomic/RC-F_69%GCF_000441585.1_ASM44158v1_genomic.gff.gz
diff --git a/...%GCF_000441735.1_ASM44173v1_genomic/RC-J(s)_122%GCF_000441735.1_ASM44173v1_genomic.gff.gz b/...%GCF_000441735.1_ASM44173v1_genomic/RC-J(s)_122%GCF_000441735.1_ASM44173v1_genomic.gff.gz
diff --git a/...943%GCF_000441655.1_ASM44165v1_genomic/RC-J_943%GCF_000441655.1_ASM44165v1_genomic.gff.gz b/...943%GCF_000441655.1_ASM44165v1_genomic/RC-J_943%GCF_000441655.1_ASM44165v1_genomic.gff.gz
diff --git a/...953%GCF_000441675.1_ASM44167v1_genomic/RC-J_953%GCF_000441675.1_ASM44167v1_genomic.gff.gz b/...953%GCF_000441675.1_ASM44167v1_genomic/RC-J_953%GCF_000441675.1_ASM44167v1_genomic.gff.gz
diff --git a/...966%GCF_000441755.1_ASM44175v1_genomic/RC-J_966%GCF_000441755.1_ASM44175v1_genomic.gff.gz b/...966%GCF_000441755.1_ASM44175v1_genomic/RC-J_966%GCF_000441755.1_ASM44175v1_genomic.gff.gz
diff --git a/...971%GCF_000441795.1_ASM44179v1_genomic/RC-J_971%GCF_000441795.1_ASM44179v1_genomic.gff.gz b/...971%GCF_000441795.1_ASM44179v1_genomic/RC-J_971%GCF_000441795.1_ASM44179v1_genomic.gff.gz
diff --git a/...3%GCF_000441695.1_ASM44169v1_genomic/RC-L2(s)_3%GCF_000441695.1_ASM44169v1_genomic.gff.gz b/...3%GCF_000441695.1_ASM44169v1_genomic/RC-L2(s)_3%GCF_000441695.1_ASM44169v1_genomic.gff.gz
diff --git a/...%GCF_000441615.1_ASM44161v1_genomic/RC-L2(s)_46%GCF_000441615.1_ASM44161v1_genomic.gff.gz b/...%GCF_000441615.1_ASM44161v1_genomic/RC-L2(s)_46%GCF_000441615.1_ASM44161v1_genomic.gff.gz
diff --git a/..._55%GCF_000441815.1_ASM44181v1_genomic/RC-L2_55%GCF_000441815.1_ASM44181v1_genomic.gff.gz b/..._55%GCF_000441815.1_ASM44181v1_genomic/RC-L2_55%GCF_000441815.1_ASM44181v1_genomic.gff.gz
diff --git a/...0%GCF_001729845.1_ASM172984v1_genomic/SB006930%GCF_001729845.1_ASM172984v1_genomic.gff.gz b/...0%GCF_001729845.1_ASM172984v1_genomic/SB006930%GCF_001729845.1_ASM172984v1_genomic.gff.gz
diff --git a/...7%GCF_001729865.1_ASM172986v1_genomic/SB008107%GCF_001729865.1_ASM172986v1_genomic.gff.gz b/...7%GCF_001729865.1_ASM172986v1_genomic/SB008107%GCF_001729865.1_ASM172986v1_genomic.gff.gz
diff --git a/...2%GCF_001729885.1_ASM172988v1_genomic/SB013112%GCF_001729885.1_ASM172988v1_genomic.gff.gz b/...2%GCF_001729885.1_ASM172988v1_genomic/SB013112%GCF_001729885.1_ASM172988v1_genomic.gff.gz
diff --git a/...1%GCF_001729905.1_ASM172990v1_genomic/SB013321%GCF_001729905.1_ASM172990v1_genomic.gff.gz b/...1%GCF_001729905.1_ASM172990v1_genomic/SB013321%GCF_001729905.1_ASM172990v1_genomic.gff.gz
diff --git a/.../SQ01%GCF_002777035.1_ASM277703v1_genomic/SQ01%GCF_002777035.1_ASM277703v1_genomic.gff.gz b/.../SQ01%GCF_002777035.1_ASM277703v1_genomic/SQ01%GCF_002777035.1_ASM277703v1_genomic.gff.gz
diff --git a/.../SQ02%GCF_002777055.1_ASM277705v1_genomic/SQ02%GCF_002777055.1_ASM277705v1_genomic.gff.gz b/.../SQ02%GCF_002777055.1_ASM277705v1_genomic/SQ02%GCF_002777055.1_ASM277705v1_genomic.gff.gz
diff --git a/.../SQ05%GCF_002777075.1_ASM277707v1_genomic/SQ05%GCF_002777075.1_ASM277707v1_genomic.gff.gz b/.../SQ05%GCF_002777075.1_ASM277707v1_genomic/SQ05%GCF_002777075.1_ASM277707v1_genomic.gff.gz
diff --git a/.../SQ06%GCF_002776915.1_ASM277691v1_genomic/SQ06%GCF_002776915.1_ASM277691v1_genomic.gff.gz b/.../SQ06%GCF_002776915.1_ASM277691v1_genomic/SQ06%GCF_002776915.1_ASM277691v1_genomic.gff.gz
diff --git a/.../SQ09%GCF_002776955.1_ASM277695v1_genomic/SQ09%GCF_002776955.1_ASM277695v1_genomic.gff.gz b/.../SQ09%GCF_002776955.1_ASM277695v1_genomic/SQ09%GCF_002776955.1_ASM277695v1_genomic.gff.gz
diff --git a/.../SQ10%GCF_002776975.1_ASM277697v1_genomic/SQ10%GCF_002776975.1_ASM277697v1_genomic.gff.gz b/.../SQ10%GCF_002776975.1_ASM277697v1_genomic/SQ10%GCF_002776975.1_ASM277697v1_genomic.gff.gz
diff --git a/.../SQ12%GCF_002776995.1_ASM277699v1_genomic/SQ12%GCF_002776995.1_ASM277699v1_genomic.gff.gz b/.../SQ12%GCF_002776995.1_ASM277699v1_genomic/SQ12%GCF_002776995.1_ASM277699v1_genomic.gff.gz
diff --git a/.../SQ14%GCF_002777015.1_ASM277701v1_genomic/SQ14%GCF_002777015.1_ASM277701v1_genomic.gff.gz b/.../SQ14%GCF_002777015.1_ASM277701v1_genomic/SQ14%GCF_002777015.1_ASM277701v1_genomic.gff.gz
diff --git a/.../SQ15%GCF_002777135.1_ASM277713v1_genomic/SQ15%GCF_002777135.1_ASM277713v1_genomic.gff.gz b/.../SQ15%GCF_002777135.1_ASM277713v1_genomic/SQ15%GCF_002777135.1_ASM277713v1_genomic.gff.gz
diff --git a/.../SQ19%GCF_002777155.1_ASM277715v1_genomic/SQ19%GCF_002777155.1_ASM277715v1_genomic.gff.gz b/.../SQ19%GCF_002777155.1_ASM277715v1_genomic/SQ19%GCF_002777155.1_ASM277715v1_genomic.gff.gz
diff --git a/.../SQ20%GCF_002776845.1_ASM277684v1_genomic/SQ20%GCF_002776845.1_ASM277684v1_genomic.gff.gz b/.../SQ20%GCF_002776845.1_ASM277684v1_genomic/SQ20%GCF_002776845.1_ASM277684v1_genomic.gff.gz
diff --git a/.../SQ24%GCF_002776885.1_ASM277688v1_genomic/SQ24%GCF_002776885.1_ASM277688v1_genomic.gff.gz b/.../SQ24%GCF_002776885.1_ASM277688v1_genomic/SQ24%GCF_002776885.1_ASM277688v1_genomic.gff.gz
diff --git a/.../SQ25%GCF_002777095.1_ASM277709v1_genomic/SQ25%GCF_002777095.1_ASM277709v1_genomic.gff.gz b/.../SQ25%GCF_002777095.1_ASM277709v1_genomic/SQ25%GCF_002777095.1_ASM277709v1_genomic.gff.gz
diff --git a/.../SQ28%GCF_002777115.1_ASM277711v1_genomic/SQ28%GCF_002777115.1_ASM277711v1_genomic.gff.gz b/.../SQ28%GCF_002777115.1_ASM277711v1_genomic/SQ28%GCF_002777115.1_ASM277711v1_genomic.gff.gz
diff --git a/.../SQ29%GCF_002776795.1_ASM277679v1_genomic/SQ29%GCF_002776795.1_ASM277679v1_genomic.gff.gz b/.../SQ29%GCF_002776795.1_ASM277679v1_genomic/SQ29%GCF_002776795.1_ASM277679v1_genomic.gff.gz
diff --git a/.../SQ32%GCF_002776745.1_ASM277674v1_genomic/SQ32%GCF_002776745.1_ASM277674v1_genomic.gff.gz b/.../SQ32%GCF_002776745.1_ASM277674v1_genomic/SQ32%GCF_002776745.1_ASM277674v1_genomic.gff.gz
diff --git a/...ults/Swab5%GCF_001213525.1_5082_8_4_genomic/Swab5%GCF_001213525.1_5082_8_4_genomic.gff.gz b/...ults/Swab5%GCF_001213525.1_5082_8_4_genomic/Swab5%GCF_001213525.1_5082_8_4_genomic.gff.gz
diff --git a/...ults/Swab6%GCF_001213045.1_5082_8_5_genomic/Swab6%GCF_001213045.1_5082_8_5_genomic.gff.gz b/...ults/Swab6%GCF_001213045.1_5082_8_5_genomic/Swab6%GCF_001213045.1_5082_8_5_genomic.gff.gz
diff --git a/...den2%GCF_000210495.1_ASM21049v1_genomic/Sweden2%GCF_000210495.1_ASM21049v1_genomic.gff.gz b/...den2%GCF_000210495.1_ASM21049v1_genomic/Sweden2%GCF_000210495.1_ASM21049v1_genomic.gff.gz
diff --git a/...ts/UCH-1%GCF_000068525.2_ASM6852v2_genomic/UCH-1%GCF_000068525.2_ASM6852v2_genomic.gff.gz b/...ts/UCH-1%GCF_000068525.2_ASM6852v2_genomic/UCH-1%GCF_000068525.2_ASM6852v2_genomic.gff.gz
diff --git a/...1%GCF_002088355.1_ASM208835v1_genomic/chxRP1H1%GCF_002088355.1_ASM208835v1_genomic.gff.gz b/...1%GCF_002088355.1_ASM208835v1_genomic/chxRP1H1%GCF_002088355.1_ASM208835v1_genomic.gff.gz
diff --git a/...%GCF_002088335.1_ASM208833v1_genomic/chxRP4D10%GCF_002088335.1_ASM208833v1_genomic.gff.gz b/...%GCF_002088335.1_ASM208833v1_genomic/chxRP4D10%GCF_002088335.1_ASM208833v1_genomic.gff.gz
diff --git a/...1%GCF_002088315.1_ASM208831v1_genomic/chxRP4F1%GCF_002088315.1_ASM208831v1_genomic.gff.gz b/...1%GCF_002088315.1_ASM208831v1_genomic/chxRP4F1%GCF_002088315.1_ASM208831v1_genomic.gff.gz
diff --git a/...e54%GCF_001293965.1_ASM129396v1_genomic/male54%GCF_001293965.1_ASM129396v1_genomic.gff.gz b/...e54%GCF_001293965.1_ASM129396v1_genomic/male54%GCF_001293965.1_ASM129396v1_genomic.gff.gz