Add a testing dataset (C. trachomatis)

labgem · Jul 3, 2018 · 68ade8c · 68ade8c
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diff --git a/testing_dataset_C_trachomatis/gene_families.tsv b/testing_dataset_C_trachomatis/gene_families.tsv
diff --git a/testing_dataset_C_trachomatis/orgs.list b/testing_dataset_C_trachomatis/orgs.list
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diff --git a/...%GCF_000319125.1_ASM31912v1_genomic/L2b_Canada1%GCF_000319125.1_ASM31912v1_genomic.gff.gz b/...%GCF_000319125.1_ASM31912v1_genomic/L2b_Canada1%GCF_000319125.1_ASM31912v1_genomic.gff.gz
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diff --git a/...ults/L2c%GCF_000220105.1_ASM22010v1_genomic/L2c%GCF_000220105.1_ASM22010v1_genomic.gff.gz b/...ults/L2c%GCF_000220105.1_ASM22010v1_genomic/L2c%GCF_000220105.1_ASM22010v1_genomic.gff.gz
diff --git a/...2tet1%GCF_000175515.1_ASM17551v1_genomic/L2tet1%GCF_000175515.1_ASM17551v1_genomic.gff.gz b/...2tet1%GCF_000175515.1_ASM17551v1_genomic/L2tet1%GCF_000175515.1_ASM17551v1_genomic.gff.gz
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diff --git a/...%GCF_001398155.1_7501_6_49_genomic/R26833extract%GCF_001398155.1_7501_6_49_genomic.gff.gz b/...%GCF_001398155.1_7501_6_49_genomic/R26833extract%GCF_001398155.1_7501_6_49_genomic.gff.gz
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diff --git a/...%GCF_001398135.1_7501_6_52_genomic/R27091extract%GCF_001398135.1_7501_6_52_genomic.gff.gz b/...%GCF_001398135.1_7501_6_52_genomic/R27091extract%GCF_001398135.1_7501_6_52_genomic.gff.gz
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diff --git a/...%GCF_001398275.1_7501_6_61_genomic/R33512extract%GCF_001398275.1_7501_6_61_genomic.gff.gz b/...%GCF_001398275.1_7501_6_61_genomic/R33512extract%GCF_001398275.1_7501_6_61_genomic.gff.gz
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diff --git a/...t%GCF_001398255.1_7501_6_62_genomic/R4175extract%GCF_001398255.1_7501_6_62_genomic.gff.gz b/...t%GCF_001398255.1_7501_6_62_genomic/R4175extract%GCF_001398255.1_7501_6_62_genomic.gff.gz
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diff --git a/...943%GCF_000441655.1_ASM44165v1_genomic/RC-J_943%GCF_000441655.1_ASM44165v1_genomic.gff.gz b/...943%GCF_000441655.1_ASM44165v1_genomic/RC-J_943%GCF_000441655.1_ASM44165v1_genomic.gff.gz
diff --git a/...953%GCF_000441675.1_ASM44167v1_genomic/RC-J_953%GCF_000441675.1_ASM44167v1_genomic.gff.gz b/...953%GCF_000441675.1_ASM44167v1_genomic/RC-J_953%GCF_000441675.1_ASM44167v1_genomic.gff.gz
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diff --git a/...0%GCF_001729845.1_ASM172984v1_genomic/SB006930%GCF_001729845.1_ASM172984v1_genomic.gff.gz b/...0%GCF_001729845.1_ASM172984v1_genomic/SB006930%GCF_001729845.1_ASM172984v1_genomic.gff.gz
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diff --git a/...1%GCF_001729905.1_ASM172990v1_genomic/SB013321%GCF_001729905.1_ASM172990v1_genomic.gff.gz b/...1%GCF_001729905.1_ASM172990v1_genomic/SB013321%GCF_001729905.1_ASM172990v1_genomic.gff.gz
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diff --git a/.../SQ12%GCF_002776995.1_ASM277699v1_genomic/SQ12%GCF_002776995.1_ASM277699v1_genomic.gff.gz b/.../SQ12%GCF_002776995.1_ASM277699v1_genomic/SQ12%GCF_002776995.1_ASM277699v1_genomic.gff.gz
diff --git a/.../SQ14%GCF_002777015.1_ASM277701v1_genomic/SQ14%GCF_002777015.1_ASM277701v1_genomic.gff.gz b/.../SQ14%GCF_002777015.1_ASM277701v1_genomic/SQ14%GCF_002777015.1_ASM277701v1_genomic.gff.gz
diff --git a/.../SQ15%GCF_002777135.1_ASM277713v1_genomic/SQ15%GCF_002777135.1_ASM277713v1_genomic.gff.gz b/.../SQ15%GCF_002777135.1_ASM277713v1_genomic/SQ15%GCF_002777135.1_ASM277713v1_genomic.gff.gz
diff --git a/.../SQ19%GCF_002777155.1_ASM277715v1_genomic/SQ19%GCF_002777155.1_ASM277715v1_genomic.gff.gz b/.../SQ19%GCF_002777155.1_ASM277715v1_genomic/SQ19%GCF_002777155.1_ASM277715v1_genomic.gff.gz
diff --git a/.../SQ20%GCF_002776845.1_ASM277684v1_genomic/SQ20%GCF_002776845.1_ASM277684v1_genomic.gff.gz b/.../SQ20%GCF_002776845.1_ASM277684v1_genomic/SQ20%GCF_002776845.1_ASM277684v1_genomic.gff.gz
diff --git a/.../SQ24%GCF_002776885.1_ASM277688v1_genomic/SQ24%GCF_002776885.1_ASM277688v1_genomic.gff.gz b/.../SQ24%GCF_002776885.1_ASM277688v1_genomic/SQ24%GCF_002776885.1_ASM277688v1_genomic.gff.gz
diff --git a/.../SQ25%GCF_002777095.1_ASM277709v1_genomic/SQ25%GCF_002777095.1_ASM277709v1_genomic.gff.gz b/.../SQ25%GCF_002777095.1_ASM277709v1_genomic/SQ25%GCF_002777095.1_ASM277709v1_genomic.gff.gz
diff --git a/.../SQ28%GCF_002777115.1_ASM277711v1_genomic/SQ28%GCF_002777115.1_ASM277711v1_genomic.gff.gz b/.../SQ28%GCF_002777115.1_ASM277711v1_genomic/SQ28%GCF_002777115.1_ASM277711v1_genomic.gff.gz
diff --git a/.../SQ29%GCF_002776795.1_ASM277679v1_genomic/SQ29%GCF_002776795.1_ASM277679v1_genomic.gff.gz b/.../SQ29%GCF_002776795.1_ASM277679v1_genomic/SQ29%GCF_002776795.1_ASM277679v1_genomic.gff.gz
diff --git a/.../SQ32%GCF_002776745.1_ASM277674v1_genomic/SQ32%GCF_002776745.1_ASM277674v1_genomic.gff.gz b/.../SQ32%GCF_002776745.1_ASM277674v1_genomic/SQ32%GCF_002776745.1_ASM277674v1_genomic.gff.gz
diff --git a/...ults/Swab5%GCF_001213525.1_5082_8_4_genomic/Swab5%GCF_001213525.1_5082_8_4_genomic.gff.gz b/...ults/Swab5%GCF_001213525.1_5082_8_4_genomic/Swab5%GCF_001213525.1_5082_8_4_genomic.gff.gz
diff --git a/...ults/Swab6%GCF_001213045.1_5082_8_5_genomic/Swab6%GCF_001213045.1_5082_8_5_genomic.gff.gz b/...ults/Swab6%GCF_001213045.1_5082_8_5_genomic/Swab6%GCF_001213045.1_5082_8_5_genomic.gff.gz
diff --git a/...den2%GCF_000210495.1_ASM21049v1_genomic/Sweden2%GCF_000210495.1_ASM21049v1_genomic.gff.gz b/...den2%GCF_000210495.1_ASM21049v1_genomic/Sweden2%GCF_000210495.1_ASM21049v1_genomic.gff.gz
diff --git a/...ts/UCH-1%GCF_000068525.2_ASM6852v2_genomic/UCH-1%GCF_000068525.2_ASM6852v2_genomic.gff.gz b/...ts/UCH-1%GCF_000068525.2_ASM6852v2_genomic/UCH-1%GCF_000068525.2_ASM6852v2_genomic.gff.gz
diff --git a/...1%GCF_002088355.1_ASM208835v1_genomic/chxRP1H1%GCF_002088355.1_ASM208835v1_genomic.gff.gz b/...1%GCF_002088355.1_ASM208835v1_genomic/chxRP1H1%GCF_002088355.1_ASM208835v1_genomic.gff.gz
diff --git a/...%GCF_002088335.1_ASM208833v1_genomic/chxRP4D10%GCF_002088335.1_ASM208833v1_genomic.gff.gz b/...%GCF_002088335.1_ASM208833v1_genomic/chxRP4D10%GCF_002088335.1_ASM208833v1_genomic.gff.gz
diff --git a/...1%GCF_002088315.1_ASM208831v1_genomic/chxRP4F1%GCF_002088315.1_ASM208831v1_genomic.gff.gz b/...1%GCF_002088315.1_ASM208831v1_genomic/chxRP4F1%GCF_002088315.1_ASM208831v1_genomic.gff.gz
diff --git a/...e54%GCF_001293965.1_ASM129396v1_genomic/male54%GCF_001293965.1_ASM129396v1_genomic.gff.gz b/...e54%GCF_001293965.1_ASM129396v1_genomic/male54%GCF_001293965.1_ASM129396v1_genomic.gff.gz